RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SF3B5Q9BWJ5 86 aaKnown RBP17.17■□□□□ 0.34
SHANK1-203ENST00000391813 ERGP11308 486 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 SPATA45Q537H7 98 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 ANKRD37Q7Z713 158 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 OR2T6Q8NHC8 308 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 FAM60AQ9NP50 221 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 TRGV5A0A0B4J1U4 118 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 ZP4Q12836 540 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 R3HDM4Q96D70 268 aa17.17■□□□□ 0.34
SHANK1-203ENST00000391813 SPAARA0A1B0GVQ0 90 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 LRRC3CA6NJW4 275 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 RPS11P62280 158 aaKnown RBP eCLIP17.16■□□□□ 0.34
SHANK1-203ENST00000391813 OR4F17Q8NGA8 305 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 DNASE2BQ8WZ79 361 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 HSD17B10Q99714 261 aaKnown RBP17.16■□□□□ 0.34
SHANK1-203ENST00000391813 A0A0U1RQV5 110 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 CA6P23280 308 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 RFESDQ8TAC1 157 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 SMIM8Q96KF7 97 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 COL25A1Q9BXS0 654 aaPredicted RBP17.16■□□□□ 0.34
SHANK1-203ENST00000391813 CORTO00230 105 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 PTPRFP10586 1907 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 Q1RN00 199 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 LINC00596Q86U02 117 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 OR10AD1Q8NGE0 317 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 TMEM230Q96A57 120 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 FSCN3Q9NQT6 498 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 DICER1Q9UPY3 1922 aaKnown RBP17.16■□□□□ 0.34
SHANK1-203ENST00000391813 SLC22A20A6NK97 555 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 SPINT1O43278 529 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 MPDU1O75352 247 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 HLA-DQA1P01909 254 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 FZD5Q13467 585 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 NRTNQ99748 197 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 SARGQ9BW04 601 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 ATG2BQ96BY7 2078 aa17.16■□□□□ 0.34
SHANK1-203ENST00000391813 IGSF23A1L1A6 192 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 ZNF205O95201 554 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 BTCP35070 178 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 OPRK1P41145 380 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 RAC3P60763 192 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 GNB1P62873 340 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 SPATA46Q5T0L3 261 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 IL19Q9UHD0 177 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 H0Y980 276 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 CRYBA2P53672 197 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 KISS1RQ969F8 398 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-203ENST00000391813 GAGE10A6NGK3 116 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 FNDC7Q5VTL7 733 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 PDPNQ86YL7 162 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 RBBP6Q7Z6E9 1792 aaKnown RBP17.15■□□□□ 0.34
SHANK1-203ENST00000391813 RIGQ13278 110 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 PRSS53Q2L4Q9 553 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 CT55Q8WUE5 264 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 RARRES2Q99969 163 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 PRDM6Q9NQX0 595 aa17.15■□□□□ 0.34
SHANK1-203ENST00000391813 PLXNA1Q9UIW2 1896 aa17.14■□□□□ 0.34
SHANK1-203ENST00000391813 RNF222A6NCQ9 220 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 ZNF708P17019 499 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 GNRHR2Q96P88 292 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 RSG1Q9BU20 258 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 TCFL5Q9UL49 500 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 A0A087WWC5 75 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 RHBDL1O75783 438 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 P01737 135 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 ID4P47928 161 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 ZNF506Q5JVG8 444 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 STXBP6Q8NFX7 210 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 HDHD3Q9BSH5 251 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-203ENST00000391813 HINT1P49773 126 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-203ENST00000391813 SAP30LQ9HAJ7 183 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 CDC42EP3Q9UKI2 254 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 MIA3Q5JRA6 1907 aa17.14■□□□□ 0.33
SHANK1-203ENST00000391813 A0A1W2PN81 502 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 TMEM250H0YL14 139 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 KLF4O43474 513 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 NUBP1P53384 320 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 PIGYQ3MUY2 71 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 OR2M7Q8NG81 312 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 SIPA1L1O43166 1804 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 ZNF638Q14966 1978 aaKnown RBP17.13■□□□□ 0.33
SHANK1-203ENST00000391813 TDRD15B5MCY1 1934 aaKnown RBP17.13■□□□□ 0.33
SHANK1-203ENST00000391813 RNPS1Q15287 305 aaKnown RBP17.13■□□□□ 0.33
SHANK1-203ENST00000391813 MOB3AQ96BX8 217 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 AMELYQ99218 206 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 LOC102724200A0A096LPH7 203 aaPredicted RBP17.13■□□□□ 0.33
SHANK1-203ENST00000391813 HIST1H1BP16401 226 aaKnown RBP17.13■□□□□ 0.33
SHANK1-203ENST00000391813 AGAP20933 346 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 SPINK9Q5DT21 86 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 OR2D3Q8NGH3 330 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 IGHV5-10-1A0A0J9YXX1 117 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 CSN3P07498 182 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 PSG2P11465 335 aa17.13■□□□□ 0.33
SHANK1-203ENST00000391813 UBE2CO00762 179 aa17.12■□□□□ 0.33
SHANK1-203ENST00000391813 SRD5A2P31213 254 aa17.12■□□□□ 0.33
SHANK1-203ENST00000391813 RBM11P57052 281 aaKnown RBP17.12■□□□□ 0.33
SHANK1-203ENST00000391813 LINC01590Q5TEZ4 76 aa17.12■□□□□ 0.33
SHANK1-203ENST00000391813 LYG1Q8N1E2 194 aa17.12■□□□□ 0.33
SHANK1-203ENST00000391813 AURKAIP1Q9NWT8 199 aaPredicted RBP17.12■□□□□ 0.33
SHANK1-203ENST00000391813 PILRBQ9UKJ0 227 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms