RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 NKX2-1P43699 371 aaPredicted RBP8.83□□□□□ -1
POLR2J3-201ENST00000379340 TMEM33P57088 247 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 RPS23P62266 143 aaKnown RBP8.83□□□□□ -1
POLR2J3-201ENST00000379340 BLOC1S1P78537 153 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 PAX5Q02548 391 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 MSMO1Q15800 293 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 NMSQ5H8A3 153 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 TRAT1Q6PIZ9 186 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 WDR82Q6UXN9 313 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 IL34Q6ZMJ4 242 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 FAM90A1Q86YD7 464 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 ZBTB34Q8NCN2 500 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 OR52M1Q8NGK5 317 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 TMED6Q8WW62 240 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 OR2S2Q9NQN1 319 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 ERRFI1Q9UJM3 462 aaPredicted RBP8.83□□□□□ -1
POLR2J3-201ENST00000379340 RCL1Q9Y2P8 373 aaKnown RBP8.83□□□□□ -1
POLR2J3-201ENST00000379340 LRBAP50851 2863 aa8.83□□□□□ -1
POLR2J3-201ENST00000379340 NKX2-6A6NCS4 301 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 HSPA12AO43301 675 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 IGHV3-13P01766 116 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 CRYAAP02489 173 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 FAM157CP0CG43 387 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SFTPCP11686 197 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 GLRXP35754 106 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SULT1A2P50226 295 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 FABP6P51161 128 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 RPL7L1Q6DKI1 246 aaKnown RBP8.82□□□□□ -1
POLR2J3-201ENST00000379340 ZNF474Q6S9Z5 364 aaPredicted RBP8.82□□□□□ -1
POLR2J3-201ENST00000379340 Q6ZR03 302 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SSX8Q7RTT4 187 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 GALNT11Q8NCW6 608 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 DMBX1Q8NFW5 382 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 OR1S2Q8NGQ3 325 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SUN5Q8TC36 379 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SMIM8Q96KF7 97 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SLC25A31Q9H0C2 315 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 ARV1Q9H2C2 271 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 C11orf1Q9H5F2 150 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 MMP26Q9NRE1 261 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 LIN7CQ9NUP9 197 aaKnown RBP8.82□□□□□ -1
POLR2J3-201ENST00000379340 ASF1BQ9NVP2 202 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 LPAR3Q9UBY5 353 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 OR14J1Q9UGF5 321 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 INTS1Q8N201 2190 aaKnown RBP8.82□□□□□ -1
POLR2J3-201ENST00000379340 A0A1B0GU03 582 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 ADAM20O43506 726 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 HEXAP06865 529 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SERPINE2P07093 398 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 SEC11BP0C7V7 166 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 RNF224P0DH78 156 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 GLI4P10075 376 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 CFHR2P36980 270 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 GTF3C1Q12789 2109 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 TESK1Q15569 626 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 C5orf24Q7Z6I8 188 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 FAM216AQ8WUB2 273 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 IL1F10Q8WWZ1 152 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 LSM10Q969L4 123 aaKnown RBP8.82□□□□□ -1
POLR2J3-201ENST00000379340 S100PBPQ96BU1 408 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 NARFLQ9H6Q4 476 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 PLEKHF2Q9H8W4 249 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 OR1A1Q9P1Q5 309 aa8.82□□□□□ -1
POLR2J3-201ENST00000379340 ZNF705EA8MWA4 302 aaPredicted RBP8.81□□□□□ -1
POLR2J3-201ENST00000379340 M0R1B8 84 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 PRRG2O14669 202 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 ZNF83P51522 516 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 VAMP2P63027 116 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 NKX6-1P78426 367 aaPredicted RBP8.81□□□□□ -1
POLR2J3-201ENST00000379340 ID3Q02535 119 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 BAXQ07812 192 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 TUSC1Q2TAM9 212 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 PRAMEF6Q5VXH4 476 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 ZNF826PQ6ZT77 177 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 MRGPRGQ86SM5 289 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 PIP4P2Q8N4L2 257 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 OR2C3Q8N628 320 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 PPP1R35Q8TAP8 253 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 GALMQ96C23 342 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 LURAP1Q96LR2 239 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 GINS3Q9BRX5 216 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 MSL2Q9HCI7 577 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 PARP11Q9NR21 331 aa8.81□□□□□ -1
POLR2J3-201ENST00000379340 FAM212BQ9NTI7 297 aaPredicted RBP8.81□□□□□ -1
POLR2J3-201ENST00000379340 RBM7Q9Y580 266 aaKnown RBP8.81□□□□□ -1
POLR2J3-201ENST00000379340 C2CD3Q4AC94 2353 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 IGLV3-9A0A075B6K5 115 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 SRRM5B3KS81 715 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 K7EM74 188 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 LGALS8O00214 317 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 WRBO00258 174 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 PSPNO60542 156 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 IL2RGP31785 369 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 CEACAM6P40199 344 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 OR3A1P47881 315 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 RAB5CP51148 216 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 KLF3P57682 345 aaPredicted RBP8.8□□□□□ -1
POLR2J3-201ENST00000379340 PJVKQ0ZLH3 352 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 ZNF266Q14584 549 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 FAM219AQ8IW50 185 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms