RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 SPRED2Q7Z698 418 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 ZNF256Q9Y2P7 627 aaPredicted RBP14.25□□□□□ -0.13
RGP1-201ENST00000378078 VSTM2AQ8TAG5 236 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 ZCCHC14Q8WYQ9 949 aaKnown RBP14.25□□□□□ -0.13
RGP1-201ENST00000378078 MAST2Q6P0Q8 1798 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 PLCH1Q4KWH8 1693 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 CA2P00918 260 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 PRR35P0CG20 571 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 RHBDD2Q6NTF9 364 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 JMJD6Q6NYC1 403 aaPredicted RBP14.25□□□□□ -0.13
RGP1-201ENST00000378078 LYZL2Q7Z4W2 148 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 RNF122Q9H9V4 155 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 GAPDHP04406 335 aaKnown RBP14.25□□□□□ -0.13
RGP1-201ENST00000378078 MVDP53602 400 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 NSUN5P1Q3KNT7 163 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 MS4A5Q9H3V2 200 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 C11orf91Q3C1V1 193 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 NUBPLQ8TB37 319 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 PIPOXQ9P0Z9 390 aa14.25□□□□□ -0.13
RGP1-201ENST00000378078 MMP9P14780 707 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 MYO5AQ9Y4I1 1855 aaKnown RBP14.24□□□□□ -0.13
RGP1-201ENST00000378078 MUC21A0A0G2JKD1 596 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 MUC21A0A140T8X8 626 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 PRR19A6NJB7 356 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 ERVFRD-1P60508 538 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 TEX30Q5JUR7 227 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 MUC21Q5SSG8 566 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 FRRS1LQ9P0K9 344 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 RCC2Q9P258 522 aaKnown RBP14.24□□□□□ -0.13
RGP1-201ENST00000378078 CEACAM18A8MTB9 384 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 HIST1H1BP16401 226 aaKnown RBP14.24□□□□□ -0.13
RGP1-201ENST00000378078 OR2Y1Q8NGV0 311 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 KCNK17Q96T54 332 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 PRDM6Q9NQX0 595 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 YAE1D1Q9NRH1 226 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 WIPI2Q9Y4P8 454 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 CXCL10P02778 98 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 RAC3P60763 192 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 ITLN1Q8WWA0 313 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 MANBALQ9NQG1 85 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 RSPO4Q2I0M5 234 aaPredicted RBP14.24□□□□□ -0.13
RGP1-201ENST00000378078 BPIFA4PQ86YQ2 179 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 ZDHHC22Q8N966 263 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 SMIM4Q8WVI0 70 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 RAX2Q96IS3 184 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 ZNF831Q5JPB2 1677 aa14.24□□□□□ -0.13
RGP1-201ENST00000378078 LRRC75BQ2VPJ9 315 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 FAM131CQ96AQ9 280 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 CDC42EP2O14613 210 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 IGF2P01344 180 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 DCAF10Q5QP82 559 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 MPC2O95563 127 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 FGF11Q92914 225 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 TP53RKQ96S44 253 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 TMEM229AB2RXF0 380 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 MBPP02686 304 aaPredicted RBP14.23□□□□□ -0.13
RGP1-201ENST00000378078 TMEM50BP56557 158 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 CX3CL1P78423 397 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 ATP5G2Q06055 141 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 SIGLEC14Q08ET2 396 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 OR8D4Q8NGM9 314 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 ZNF707Q96C28 371 aaPredicted RBP14.23□□□□□ -0.13
RGP1-201ENST00000378078 WFDC12Q8WWY7 111 aa14.23□□□□□ -0.13
RGP1-201ENST00000378078 MRPL24Q96A35 216 aaKnown RBP14.23□□□□□ -0.13
RGP1-201ENST00000378078 DUXBA0A1W2PPF3 345 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 K7N7A8 449 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 ALX3O95076 343 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 ACAA1P09110 424 aaPredicted RBP14.22□□□□□ -0.13
RGP1-201ENST00000378078 INHBBP09529 407 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 CISD3P0C7P0 127 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 LTBRP36941 435 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 ZNF385AQ96PM9 386 aaKnown RBP14.22□□□□□ -0.13
RGP1-201ENST00000378078 TCRBV5S1A1TA0A578 114 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 C7orf71A4D174 169 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 SFTPCP11686 197 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 UNQ9370/PRO34162Q6UXP9 181 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 OR52M1Q8NGK5 317 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 TCRBV16S1A1N1A0A5B0 115 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 NKX2-2O95096 273 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 GPX1P07203 203 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 SLC25A1P53007 311 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 SIGIRRQ6IA17 410 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 WDR73Q6P4I2 378 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 CALHM1Q8IU99 346 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 SF3B6Q9Y3B4 125 aaKnown RBP14.22□□□□□ -0.13
RGP1-201ENST00000378078 MPC1Q9Y5U8 109 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 EDIL3O43854 480 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 OR2A4O95047 310 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 HLA-DRB3P79483 266 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 FXYD3Q14802 87 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 OR1L8Q8NGR8 309 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 OR2A7Q96R45 310 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 LIPT2A6NK58 231 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 CLDN34H7C241 214 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 ARRDC1Q8N5I2 433 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 RPS4Y2Q8TD47 263 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 AQP10Q96PS8 301 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 TMEM191AQ9H0A3 160 aa14.22□□□□□ -0.13
RGP1-201ENST00000378078 LPAR3Q9UBY5 353 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms