RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TMEM171Q8WVE6 324 aa13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 GPR146Q96CH1 333 aa13.46□□□□□ -0.25
CNKSR1-202ENST00000374253 BORCS7-ASMTA0A0B4J1R7 106 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 IGKV1-39P01597 117 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 PRH1P02810 166 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 IGKV1D-39P04432 117 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 GPR157Q5UAW9 335 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 WDR82Q6UXN9 313 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 OR2Z1Q8NG97 314 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 OR52L2PQ8NGH6 319 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 OR5D13Q8NGL4 314 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 MRGPRDQ8TDS7 321 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 SAT2Q96F10 170 aaPredicted RBP13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 PLPPR2Q96GM1 343 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 FAM215AQ9Y5M1 114 aa13.46□□□□□ -0.26
CNKSR1-202ENST00000374253 M0R1B8 84 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 GABRA2P47869 451 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 MIDNQ504T8 468 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 BTNL8Q6UX41 500 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 ODF3L1Q8IXM7 274 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 ZNF808Q8N4W9 903 aaPredicted RBP13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 RFESDQ8TAC1 157 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 S100PBPQ96BU1 408 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 SPIN2AQ99865 258 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 SPIN2BQ9BPZ2 258 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 DCTN5Q9BTE1 182 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 C11orf1Q9H5F2 150 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 IGHV3-43A0A0B4J1X8 118 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 OR5H1A6NKK0 313 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 WRBO00258 174 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 IGHV3-43DP0DP04 118 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 CEACAM1P13688 526 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 MDH2P40926 338 aaKnown RBP13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 LTC4SQ16873 150 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 ZNF718Q3SXZ3 478 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 AKIRIN2Q53H80 203 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 ZNF474Q6S9Z5 364 aaPredicted RBP13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 TMEM252Q8N6L7 170 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 OR5C1Q8NGR4 320 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 ABHD14AQ9BUJ0 271 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 CXXC4Q9H2H0 198 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 ZFP57Q9NU63 452 aa13.45□□□□□ -0.26
CNKSR1-202ENST00000374253 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 C12orf77C9JDV5 145 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 IL34Q6ZMJ4 242 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 CBLN2Q8IUK8 224 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 FAM212BQ9NTI7 297 aaPredicted RBP13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 GLS2Q9UI32 602 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 TMEM210A6NLX4 147 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 DEFB108AA8MXU0 73 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 RNASEK-C17orf49H0YIS7 233 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 PVALBP20472 110 aaPredicted RBP13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 S100GP29377 79 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 SSTR5P35346 364 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 GLIPR1P48060 266 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 CAMLGP49069 296 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 DYNLT3P51808 116 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 LINC00205P59089 165 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 RUNX1Q01196 453 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 TAGLNQ01995 201 aaKnown RBP13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 EDDM3AQ14507 147 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 IGF2-ASQ6U949 168 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 ACP7Q6ZNF0 438 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 RBMXL3Q8N7X1 1067 aaKnown RBP13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 C1orf162Q8NEQ5 155 aaPredicted RBP13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 COQ2Q96H96 371 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 CACNG5Q9UF02 275 aa13.44□□□□□ -0.26
CNKSR1-202ENST00000374253 DOCK11Q5JSL3 2073 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 IGLV1-44P01699 117 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 SFTA3P0C7M3 94 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 SPP1P10451 314 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 IAPPP10997 89 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 NPBWR1P48145 328 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 COL10A1Q03692 680 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 TMEM267Q0VDI3 215 aaPredicted RBP13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 C22orf34Q6ZV56 151 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 DRAM1Q8N682 238 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 GINS3Q9BRX5 216 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 ARV1Q9H2C2 271 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 HES4Q9HCC6 221 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 PARP11Q9NR21 331 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 LYRM2Q9NU23 88 aaPredicted RBP13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 MBNL3Q9NUK0 354 aaKnown RBP13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 SLC25A15Q9Y619 301 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 TSPAN15O95858 294 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 HEXAP06865 529 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 PPP1CCP36873 323 aaKnown RBP13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 F2RL1P55085 397 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 ID3Q02535 119 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 SMUG1Q53HV7 270 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 BTNL3Q6UXE8 466 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 LRRC29Q8WV35 223 aa13.43□□□□□ -0.26
CNKSR1-202ENST00000374253 IGHV3OR15-7A0A075B7D8 119 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 MBD3L4A6NDZ8 208 aaPredicted RBP13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 MBD3L3A6NE82 208 aaPredicted RBP13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 MBD3L5A6NJ08 208 aaPredicted RBP13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 IGKV1-5P01602 117 aa13.42□□□□□ -0.26
CNKSR1-202ENST00000374253 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms