RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 H3BMQ9 156 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 GFYI3L273 518 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 GABRPO00591 440 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 IGF2P01344 180 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 C1QBP02746 253 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 HOXD4P09016 255 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 OR8U8P0C7N1 319 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 RBMY1DP0C7P1 496 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 PSG1P11464 419 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 PVRP15151 417 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CEACAM8P31997 349 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 MDH2P40926 338 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 RARRES1P49788 294 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 OR1D5P58170 312 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 TPI1P60174 286 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 RPL27P61353 136 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 RRAS2P62070 204 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 SELENOTP62341 195 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 EMX1Q04741 257 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CD47Q08722 323 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 RBM39Q14498 530 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CDK10Q15131 360 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 TAF9Q16594 264 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 TPTE2P1Q5T6R2 138 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 HENMT1Q5T8I9 393 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 ZNF730Q6ZMV8 503 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 PRSS41Q7RTY9 318 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 PIWIL4Q7Z3Z4 852 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CEACAM19Q7Z692 300 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CDC20BQ86Y33 519 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CLIP4Q8N3C7 705 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 ARRDC1Q8N5I2 433 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 ZNF614Q8N883 585 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 GDPD1Q8N9F7 314 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 GATAD1Q8WUU5 269 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 TCTEX1D2Q8WW35 142 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 LRRC58Q96CX6 371 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 DCUN1D1Q96GG9 259 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 NARS2Q96I59 477 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 C4orf45Q96LM5 186 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CNBD2Q96M20 576 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 MS4A4EQ96PG1 132 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 OR7D2Q96RA2 312 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 ZNF382Q96SR6 550 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 P2RX4Q99571 388 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 RSPO3Q9BXY4 272 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 MAP1LC3BQ9GZQ8 125 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 TMEM126AQ9H061 195 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 A4GALTQ9NPC4 353 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 MEPEQ9NQ76 525 aaPredicted RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 SERTAD4Q9NUC0 356 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 SS18L2Q9UHA2 77 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 SLC7A7Q9UM01 511 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CARHSP1Q9Y2V2 147 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 FBXO7Q9Y3I1 522 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 OR51B2Q9Y5P1 312 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 CITO14578 2027 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 DYNC2H1Q8NCM8 4307 aaKnown RBP2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 PIKFYVEQ9Y2I7 2098 aa2.88□□□□□ -1.95
ECHDC1-205ENST00000368295 COL7A1Q02388 2944 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 A0A096LPI6 279 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 IGHV2OR16-5A0A0B4J2B6 119 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 IGHV5-10-1A0A0J9YXX1 117 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 MEIOCA2RUB1 952 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR4C46A6NHA9 309 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 SMKR1H3BMG3 65 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TNFRSF13BO14836 293 aaPredicted RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 BUB3O43684 328 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 FKBP6O75344 327 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OAS1P00973 400 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 IGHV2-5P01817 119 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 APOA2P02652 100 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 HPNP05981 417 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CD37P11049 281 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CDKN2BP42772 138 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CA7P43166 264 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 NCALDP61601 193 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 HSPE1P61604 102 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 PKIAP61925 76 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 SNRPD1P62314 119 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TMEM52BQ4KMG9 183 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 AKR1C8PQ5T2L2 129 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 STEAP4Q687X5 459 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 LAMTOR1Q6IAA8 161 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR4C11Q6IEV9 310 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ALKAL1Q6UXT8 129 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 Q6ZSR6 202 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 TMPPEQ6ZT21 453 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 C1orf158Q8N1D5 194 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 PNKDQ8N490 385 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 CHST4Q8NCG5 386 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 OR2G2Q8NGZ5 317 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 ZFAND1Q8TCF1 268 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 DYRK2Q92630 601 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 RASL10AQ92737 203 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 BORCS7Q96B45 105 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 GALMQ96C23 342 aa2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 RPUSD4Q96CM3 377 aaKnown RBP2.87□□□□□ -1.95
ECHDC1-205ENST00000368295 SEC22AQ96IW7 307 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms