RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 WRBO00258 174 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 ADAM20O43506 726 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 APOC3P02656 99 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 ALKBH6Q3KRA9 238 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 DMBX1Q8NFW5 382 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 OR10Z1Q8NGY1 313 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 GALMQ96C23 342 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 MUCL1Q96DR8 90 aa11.83□□□□□ -0.52
USF1-202ENST00000368020 STRAPQ9Y3F4 350 aaKnown RBP11.83□□□□□ -0.52
USF1-202ENST00000368020 RBM7Q9Y580 266 aaKnown RBP11.83□□□□□ -0.52
USF1-202ENST00000368020 NBASA2RRP1 2371 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 TMEM218A2RU14 115 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 H0YL77 283 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 PITX3O75364 302 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 SCO1O75880 301 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 HEXAP06865 529 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 CAV2P51636 162 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 RPS23P62266 143 aaKnown RBP11.82□□□□□ -0.52
USF1-202ENST00000368020 TAGLNQ01995 201 aaKnown RBP11.82□□□□□ -0.52
USF1-202ENST00000368020 ID3Q02535 119 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 LY6DQ14210 128 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 WDR82Q6UXN9 313 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 SVBPQ8N300 66 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 TCTEX1D1Q8N7M0 179 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 TOLLIPQ9H0E2 274 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 C11orf1Q9H5F2 150 aa11.82□□□□□ -0.52
USF1-202ENST00000368020 ATG12O94817 140 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 CRYAAP02489 173 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 SPP1P10451 314 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 EWSR1Q01844 656 aaKnown RBP eCLIP11.81□□□□□ -0.52
USF1-202ENST00000368020 TESK1Q15569 626 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 SSX8Q7RTT4 187 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 NINJ1Q92982 152 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 OR14J1Q9UGF5 321 aa11.81□□□□□ -0.52
USF1-202ENST00000368020 HEATR1Q9H583 2144 aaKnown RBP11.81□□□□□ -0.52
USF1-202ENST00000368020 IGSF10Q6WRI0 2623 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 TRIM77I1YAP6 450 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 FBXO24O75426 580 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
USF1-202ENST00000368020 DANCRP0C864 163 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 CFHR2P36980 270 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 FABP6P51161 128 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 FAM219AQ8IW50 185 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 C11orf53Q8IXP5 236 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 RNASE11Q8TAA1 199 aaKnown RBP11.8□□□□□ -0.52
USF1-202ENST00000368020 PPP1R35Q8TAP8 253 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 FAM57AQ8TBR7 257 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 ERGIC1Q969X5 290 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 RAB40CQ96S21 281 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 SMIM3Q9BZL3 60 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 OR1A1Q9P1Q5 309 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 CARHSP1Q9Y2V2 147 aaKnown RBP11.8□□□□□ -0.52
USF1-202ENST00000368020 ARID1AO14497 2285 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 UMAD1C9J7I0 102 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 SSSCA1O60232 199 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 IL2RGP31785 369 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 CEACAM6P40199 344 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 RPL23AP62750 156 aaKnown RBP11.8□□□□□ -0.52
USF1-202ENST00000368020 MST1LQ2TV78 715 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 C10orf91Q5T1B1 145 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 ZNF645Q8N7E2 425 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 LRRC46Q96FV0 321 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 LURAP1Q96LR2 239 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 TSNAXQ99598 290 aaKnown RBP11.8□□□□□ -0.52
USF1-202ENST00000368020 SEC11CQ9BY50 192 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 HRH4Q9H3N8 390 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 KCNS2Q9ULS6 477 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 FAM215AQ9Y5M1 114 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 NBEAQ8NFP9 2946 aa11.8□□□□□ -0.52
USF1-202ENST00000368020 ZFYVE26Q68DK2 2539 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 ATXN7O15265 892 aaPredicted RBP11.79□□□□□ -0.52
USF1-202ENST00000368020 TNFSF12O43508 249 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 IGHV3-13P01766 116 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 CEACAM8P31997 349 aaPredicted RBP11.79□□□□□ -0.52
USF1-202ENST00000368020 GLRXP35754 106 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 LPAR6P43657 344 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 SELENOVP59797 346 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 POLR2GP62487 172 aaKnown RBP eCLIP11.79□□□□□ -0.52
USF1-202ENST00000368020 DEFA5Q01523 94 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 IGFBP7Q16270 282 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 BTNL8Q6UX41 500 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 Q6ZR03 302 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 STX12Q86Y82 276 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 PRR18Q8N4B5 295 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 LFNGQ8NES3 379 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 GNPNAT1Q96EK6 184 aaPredicted RBP11.79□□□□□ -0.52
USF1-202ENST00000368020 RAB9BQ9NP90 201 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 ZDHHC8Q9ULC8 765 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 ZNF835Q9Y2P0 537 aa11.79□□□□□ -0.52
USF1-202ENST00000368020 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
USF1-202ENST00000368020 FAM90A26D6RGX4 464 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 PSPNO60542 156 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 PSG2P11465 335 aa11.78□□□□□ -0.52
USF1-202ENST00000368020 KLF3P57682 345 aaPredicted RBP11.78□□□□□ -0.52
USF1-202ENST00000368020 RBPJQ06330 500 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms