RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 DCUN1D4Q92564 292 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 DYRK2Q92630 601 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 SCGB3A2Q96PL1 93 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 HDHD3Q9BSH5 251 aaPredicted RBP12.33□□□□□ -0.44
CXCL12-201ENST00000343575 MS4A5Q9H3V2 200 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 TREM2Q9NZC2 230 aa12.33□□□□□ -0.44
CXCL12-201ENST00000343575 TRAV24A0A0B4J272 114 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 TFF1P04155 84 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 PGAM2P15259 253 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 FUT3P21217 361 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 ACTBL2Q562R1 376 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 FAM201AQ5SY85 155 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 FN3KRPQ9HA64 309 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 RAB18Q9NP72 206 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 EDARQ9UNE0 448 aa12.32□□□□□ -0.44
CXCL12-201ENST00000343575 MEX3AA1L020 520 aaKnown RBP12.31□□□□□ -0.44
CXCL12-201ENST00000343575 C5orf51A6NDU8 294 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 CCSO14618 274 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 IFNA6P05013 189 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 FAM157CP0CG43 387 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 GLRA1P23415 457 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 TNFSF4P23510 183 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 NPBWR1P48145 328 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 CEBPDP49716 269 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-201ENST00000343575 OR4A4PQ8NGN8 299 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 AQP10Q96PS8 301 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 DYNLRB1Q9NP97 96 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 AK3Q9UIJ7 227 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 ANAPC10Q9UM13 185 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 DSCAMO60469 2012 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 ZNF705EA8MWA4 302 aaPredicted RBP12.31□□□□□ -0.44
CXCL12-201ENST00000343575 UBE2CO00762 179 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 CA11O75493 328 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 EIF3GO75821 320 aaKnown RBP eCLIP12.31□□□□□ -0.44
CXCL12-201ENST00000343575 OR2H2O95918 312 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 POLR2GP62487 172 aaKnown RBP eCLIP12.31□□□□□ -0.44
CXCL12-201ENST00000343575 TESK1Q15569 626 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 PRSS54Q6PEW0 395 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 TRAPPC6BQ86SZ2 158 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 DTX2Q86UW9 622 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 ERGIC1Q969X5 290 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 CMSS1Q9BQ75 279 aaKnown RBP12.31□□□□□ -0.44
CXCL12-201ENST00000343575 CYTL1Q9NRR1 136 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 CBLN4Q9NTU7 201 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
CXCL12-201ENST00000343575 COLCA2A8K830 154 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 CYB5R3P00387 301 aaPredicted RBP12.3□□□□□ -0.44
CXCL12-201ENST00000343575 FABP1P07148 127 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 S100PP25815 95 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 KCNJ3P48549 501 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 SMCO1Q147U7 214 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 SPIN3Q5JUX0 258 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 COMMD1Q8N668 190 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 SUMF2Q8NBJ7 301 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 OR4S1Q8NGB4 309 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 OCSTAMPQ9BR26 566 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 SAP30LQ9HAJ7 183 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 METRNQ9UJH8 293 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 KPTNQ9Y664 436 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 AKAP6Q13023 2319 aa12.3□□□□□ -0.44
CXCL12-201ENST00000343575 IGKV1D-17A0A075B6S4 117 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 CEACAM18A8MTB9 384 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 SLC33A1O00400 549 aaPredicted RBP12.29□□□□□ -0.44
CXCL12-201ENST00000343575 PSPNO60542 156 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 S100A6P06703 90 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 AMY2BP19961 511 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 TMEM128Q5BJH2 165 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 CD177Q8N6Q3 437 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 BOLLQ8N9W6 283 aaKnown RBP12.29□□□□□ -0.44
CXCL12-201ENST00000343575 RDH5Q92781 318 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 RNF7Q9UBF6 113 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 UTP20O75691 2785 aaKnown RBP12.29□□□□□ -0.44
CXCL12-201ENST00000343575 IGKV1D-8A0A087WSZ0 117 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 C5orf52A6NGY3 159 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 RNASEK-C17orf49H0YIS7 233 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 HSPB6O14558 160 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 DEGS1O15121 323 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 ZNF205O95201 554 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 HAND1O96004 215 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 KNG1P01042 644 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 MT-ND4LP03901 98 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 PSG2P11465 335 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 VAMP1P23763 118 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 LMO1P25800 156 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 PPOXP50336 477 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 AKR1C2P52895 323 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 AKR1C1Q04828 323 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 ARFRP1Q13795 201 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 OR52W1Q6IF63 320 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 HOGA1Q86XE5 327 aa12.29□□□□□ -0.44
CXCL12-201ENST00000343575 ARRDC1Q8N5I2 433 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms