RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 FAM53AQ6NSI3 398 aaPredicted RBP14.01□□□□□ -0.17
HDDC3-201ENST00000330334 LRRTM1Q86UE6 522 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 Q8N9W7 124 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 OR51D1Q8NGF3 324 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 OR1L1Q8NH94 360 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 NOL4LQ96MY1 436 aaPredicted RBP14.01□□□□□ -0.17
HDDC3-201ENST00000330334 GON7Q9BXV9 100 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 TAF9BQ9HBM6 251 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 KCNIP1Q9NZI2 227 aa14.01□□□□□ -0.17
HDDC3-201ENST00000330334 IGHV3-72A0A0B4J1Y9 119 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 NCBP2LA6PVI3 153 aaKnown RBP14□□□□□ -0.17
HDDC3-201ENST00000330334 AP4M1O00189 453 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 SLC31A2O15432 143 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 LANCL1O43813 399 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 SRMP19623 302 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 GABPB1Q06547 395 aaPredicted RBP14□□□□□ -0.17
HDDC3-201ENST00000330334 MORN2Q502X0 79 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 STPG2Q8N412 459 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 OR2S2Q9NQN1 319 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 AURKAIP1Q9NWT8 199 aaPredicted RBP14□□□□□ -0.17
HDDC3-201ENST00000330334 JPT1Q9UK76 154 aa14□□□□□ -0.17
HDDC3-201ENST00000330334 UBE2QL1A1L167 161 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 VSIG8P0DPA2 414 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 GPR12P47775 334 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 RPS27AP62979 156 aaKnown RBP13.99□□□□□ -0.17
HDDC3-201ENST00000330334 INSL4Q14641 139 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 IRF3Q14653 427 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 KHDC1LQ5JSQ8 128 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 TEX38Q6PEX7 206 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 OR2W3Q7Z3T1 314 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 PRR18Q8N4B5 295 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 LINC00482Q8N8I6 264 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 KCNG3Q8TAE7 436 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 MRPL30Q8TCC3 161 aaKnown RBP13.99□□□□□ -0.17
HDDC3-201ENST00000330334 MRAPQ8TCY5 172 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 FAM46BQ96A09 425 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 S1PR3Q99500 378 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 ZNF580Q9UK33 172 aa13.99□□□□□ -0.17
HDDC3-201ENST00000330334 SLC22A1O15245 554 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 YPEL1O60688 119 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 MPIG6BO95866 241 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 UCHL1P09936 223 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 CHATP28329 748 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 THBS3P49746 956 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 PNLIPRP3Q17RR3 467 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 FAM27D1Q5T7N8 215 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 CEACAM19Q7Z692 300 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 FAM71E2Q8N5Q1 922 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 OR10V1Q8NGI7 309 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 NEDD4LQ96PU5 975 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 YPEL2Q96QA6 119 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 TMED9Q9BVK6 235 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 TM2D1Q9BX74 207 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 GPR61Q9BZJ8 451 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 DUSP21Q9H596 190 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 NKX1-2Q9UD57 310 aaPredicted RBP13.98□□□□□ -0.17
HDDC3-201ENST00000330334 TPRKBQ9Y3C4 175 aa13.98□□□□□ -0.17
HDDC3-201ENST00000330334 LINC01548A6NM66 108 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 ZNF736B4DX44 427 aaPredicted RBP13.97□□□□□ -0.17
HDDC3-201ENST00000330334 ANKRD65E5RJM6 399 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 RGS11O94810 467 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 MYCNOSP40205 109 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 QRFPP83859 136 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 TPBGQ13641 420 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 MED22Q15528 200 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 HSD17B12Q53GQ0 312 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 RBM48Q5RL73 367 aaKnown RBP13.97□□□□□ -0.17
HDDC3-201ENST00000330334 ETV3LQ6ZN32 361 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 MRPL41Q8IXM3 137 aaKnown RBP13.97□□□□□ -0.17
HDDC3-201ENST00000330334 RNF152Q8N8N0 203 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 GALMQ96C23 342 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 RASL11BQ9BPW5 248 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 TMEM59Q9BXS4 323 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 ISYNA1Q9NPH2 558 aa13.97□□□□□ -0.17
HDDC3-201ENST00000330334 TMEM14DPA8MWL7 114 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 BPNT1O95861 308 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 HTR2CP28335 458 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 EGFEM1PQ0D2K5 195 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 LSAMPQ13449 338 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 HMGN3Q15651 99 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 ODF3L1Q8IXM7 274 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 OR52L2PQ8NGH6 319 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 NRG4Q8WWG1 115 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 UFD1Q92890 307 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 P2RX4Q99571 388 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 SULT4A1Q9BR01 284 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 CHCHD6Q9BRQ6 235 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 ABHD14AQ9BUJ0 271 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 MCRIP2Q9BUT9 160 aaKnown RBP13.96□□□□□ -0.17
HDDC3-201ENST00000330334 LINC00527Q9UJ94 153 aa13.96□□□□□ -0.17
HDDC3-201ENST00000330334 RRP9O43818 475 aaKnown RBP13.95□□□□□ -0.18
HDDC3-201ENST00000330334 NAPSAO96009 420 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 IGF1P05019 195 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 ELANEP08246 267 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 MYF6P23409 242 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 PSMA1P25786 263 aaKnown RBP13.95□□□□□ -0.18
HDDC3-201ENST00000330334 SOX6P35712 828 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 F2RL1P55085 397 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 AQP4P55087 323 aa13.95□□□□□ -0.18
HDDC3-201ENST00000330334 UNC119Q13432 240 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 611.9 ms