RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 BTNL8Q6UX41 500 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 WDR82Q6UXN9 313 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 LINC00596Q86U02 117 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 POC1AQ8NBT0 407 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 GCDHQ92947 438 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-202ENST00000324340 MEGF10Q96KG7 1140 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 AQP10Q96PS8 301 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 ST3GAL6Q9Y274 331 aa10.76□□□□□ -0.69
DDX39A-202ENST00000324340 C17orf100A8MU93 164 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF705EA8MWA4 302 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-202ENST00000324340 FAM157AC9JC47 383 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 TXNL1O43396 289 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 SPRY3O43610 288 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 CA11O75493 328 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 DUS4LO95620 317 aaKnown RBP10.75□□□□□ -0.69
DDX39A-202ENST00000324340 CD3DP04234 171 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF735P0CB33 412 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 RNF224P0DH78 156 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 PET100P0DJ07 73 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 PTHLHP12272 177 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 S100A2P29034 98 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 BLVRBP30043 206 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-202ENST00000324340 SULT1A2P50226 295 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 PKIAP61925 76 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 SRSF1Q07955 248 aaKnown RBP eCLIP10.75□□□□□ -0.691e-6■■□□□ 12.1
DDX39A-202ENST00000324340 HNF4GQ14541 408 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 IL13RA2Q14627 380 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 TAF9Q16594 264 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 MPV17LQ2QL34 196 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 FAM58AQ8N1B3 248 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 ARL6IP6Q8N6S5 226 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 ERGIC1Q969X5 290 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 SEH1LQ96EE3 360 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 TMEM68Q96MH6 324 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 OR2V2Q96R30 315 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 CHST6Q9GZX3 395 aa10.75□□□□□ -0.69
DDX39A-202ENST00000324340 A0A1B0GW64 132 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 TMEM235A6NFC5 223 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 SERPINE3A8MV23 424 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 GEMIN2O14893 280 aaKnown RBP10.74□□□□□ -0.69
DDX39A-202ENST00000324340 GPR37O15354 613 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 GAPDHP04406 335 aaKnown RBP10.74□□□□□ -0.69
DDX39A-202ENST00000324340 GNB3P16520 340 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 TNFSF4P23510 183 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 GABRR1P24046 479 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 NFYBP25208 207 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 CHATP28329 748 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 TNFAIP6P98066 277 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-202ENST00000324340 SSX2Q16385 188 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 OR52W1Q6IF63 320 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF565Q8N9K5 539 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 CHST4Q8NCG5 386 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 Q8TCH9 128 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 ITLN1Q8WWA0 313 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 C14orf144Q96I85 54 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 ARHGAP5-AS1Q96IT6 56 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 KIRREL1Q96J84 757 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF488Q96MN9 340 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 CLCC1Q96S66 551 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 SULT4A1Q9BR01 284 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 PECRQ9BY49 303 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 MS4A5Q9H3V2 200 aa10.74□□□□□ -0.69
DDX39A-202ENST00000324340 ZMAT3Q9HA38 289 aaKnown RBP10.74□□□□□ -0.69
DDX39A-202ENST00000324340 CHMP1AQ9HD42 196 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-202ENST00000324340 CLEC18AA5D8T8 446 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 A6NLC8 198 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 PDCD6O75340 191 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 GUCA2AQ02747 115 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF146Q15072 292 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 TESK1Q15569 626 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 SPRNQ5BIV9 151 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 SPIN3Q5JUX0 258 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 PRSS54Q6PEW0 395 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 CLEC18BQ6UXF7 455 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF826PQ6ZT77 177 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 RTN4RL2Q86UN3 420 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 BATF2Q8N1L9 274 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 MUC15Q8N387 334 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 CLEC18CQ8NCF0 446 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 OR13D1Q8NGV5 346 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 EMG1Q92979 244 aaKnown RBP10.73□□□□□ -0.69
DDX39A-202ENST00000324340 RAB24Q969Q5 203 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 FN3KRPQ9HA64 309 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 C1orf123Q9NWV4 160 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 GAR1Q9NY12 217 aaKnown RBP10.73□□□□□ -0.69
DDX39A-202ENST00000324340 IL36RNQ9UBH0 155 aa10.73□□□□□ -0.69
DDX39A-202ENST00000324340 RELNP78509 3460 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 IGHV3-64DA0A0J9YX35 117 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 C7orf77A4D0Y5 90 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 ZNF736B4DX44 427 aaPredicted RBP10.72□□□□□ -0.69
DDX39A-202ENST00000324340 LHBP01229 141 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 HLA-AP01891 365 aaKnown RBP10.72□□□□□ -0.69
DDX39A-202ENST00000324340 AMY2AP04746 511 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 TNFRSF1AP19438 455 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 FUT3P21217 361 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 AKR1C2P52895 323 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 SRSF3P84103 164 aaKnown RBP10.72□□□□□ -0.69
DDX39A-202ENST00000324340 AKR1C1Q04828 323 aa10.72□□□□□ -0.69
DDX39A-202ENST00000324340 C6orf201Q7Z4U5 140 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms