RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 A0A0J9YW62 118 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 MBP02144 154 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 S100GP29377 79 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 CEACAM6P40199 344 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 HLA-BQ31612 363 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 C9orf135Q5VTT2 229 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 ABLIM2Q6H8Q1 611 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 RHBDD2Q6NTF9 364 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 HAPLN4Q86UW8 402 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 RPP25LQ8N5L8 163 aaKnown RBP12.54□□□□□ -0.4
COL6A2-202ENST00000310645 LOC102725191A0A1B0GVB3 256 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 H0Y980 276 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 KBTBD11O94819 623 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 IGKV1D-33P01593 117 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 IGKV1-33P01594 117 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 CCL2P13500 99 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 EGR1P18146 543 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 NTF4P34130 210 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 PSMB3P49720 205 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 TMEM41BQ5BJD5 291 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 Q6ZSR3 168 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 TMEM170AQ8WVE7 144 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 DCAF16Q9NXF7 216 aa12.54□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF816-ZNF321PA0A0X1KG74 233 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 SCRG1O75711 98 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 HRASP01112 189 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 ZDHHC23Q8IYP9 409 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 IGHV1OR15-9A0A0B4J2B8 117 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 hCG_38984A0A1B0GV85 526 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 A0A1B0GWJ7 208 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 A0A1W2PR77 199 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 TP53I11O14683 189 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 CD27P26842 260 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 HBG1P69891 147 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 HBG2P69892 147 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 SHHQ15465 462 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 FAM78BQ5VT40 261 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-202ENST00000310645 TMEM256Q8N2U0 113 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 ZNF488Q96MN9 340 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 SRXN1Q9BYN0 137 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 IGLV3-32A0A0A0MS00 114 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 B4E171 279 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 CST2P09228 141 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 TSPAN7P41732 249 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 OR10V1Q8NGI7 309 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 DNASE2BQ8WZ79 361 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 IL22RA2Q969J5 263 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 ACY3Q96HD9 319 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 KCNS2Q9ULS6 477 aa12.53□□□□□ -0.4
COL6A2-202ENST00000310645 CHCHD2Q9Y6H1 151 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-202ENST00000310645 CCL3P10147 92 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 ERVFC1-1P60608 527 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 LRRC75BQ2VPJ9 315 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 CEACAM16Q2WEN9 425 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 TMEM42Q69YG0 159 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 C20orf204Q6ZNR8 217 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 OR56B2PQ8NGI1 322 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 SDSLQ96GA7 329 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 RNF150Q9ULK6 438 aa12.52□□□□□ -0.4
COL6A2-202ENST00000310645 A0A0U1RQK1 487 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 DUXBA0A1W2PPF3 345 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 ZNF320A2RRD8 509 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 VAMP5O95183 116 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 GYPAP02724 150 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 ZNF845Q96IR2 970 aaPredicted RBP12.52□□□□□ -0.41
COL6A2-202ENST00000310645 PYGO2Q9BRQ0 406 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 KIR2DS1A0A191URI9 304 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 CLDN1O95832 211 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 PDGFBP01127 241 aaPredicted RBP12.52□□□□□ -0.41
COL6A2-202ENST00000310645 KIR2DS4P43632 304 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 CNN1P51911 297 aaKnown RBP12.52□□□□□ -0.41
COL6A2-202ENST00000310645 KIR2DS1Q14954 304 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 FADS6Q8N9I5 356 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 OR10J5Q8NHC4 309 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 WDR61Q9GZS3 305 aaKnown RBP12.52□□□□□ -0.41
COL6A2-202ENST00000310645 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 CRIM1Q9NZV1 1036 aa12.52□□□□□ -0.41
COL6A2-202ENST00000310645 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.41
COL6A2-202ENST00000310645 FREM1Q5H8C1 2179 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 PAGE4O60829 102 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 PIAS2O75928 621 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 SERF2P84101 59 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 SLC38A11Q08AI6 406 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 COA6Q5JTJ3 125 aaKnown RBP12.51□□□□□ -0.41
COL6A2-202ENST00000310645 FOXL2NBQ6ZUU3 175 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 AAED1Q7RTV5 226 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 TGIF2LYQ8IUE0 185 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 RNF138Q8WVD3 245 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL6A2-202ENST00000310645 MS4A10Q96PG2 267 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 TMEM38BQ9NVV0 291 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 OR6C3Q9NZP0 311 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
COL6A2-202ENST00000310645 C1QTNF9BB2RNN3 333 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 NUPR1O60356 82 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 TUSC2O75896 110 aa12.51□□□□□ -0.41
COL6A2-202ENST00000310645 EDN3P14138 238 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms