RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CEACAM16Q2WEN9 425 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.54□□□□□ -0.4
COL6A2-201ENST00000300527 OR56B2PQ8NGI1 322 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 OR51G1Q8NGK1 321 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 C1QTNF9BB2RNN3 333 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 LMO7DNF2Z398 122 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 NPSP0C0P6 89 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 UCP1P25874 307 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 RAB35Q15286 201 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 TCF23Q7RTU1 214 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 GDF9O60383 454 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 F2RP25116 425 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 HBG1P69891 147 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 HBG2P69892 147 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 PSG4Q00888 419 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 ZNF525Q8N782 197 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 RNF115Q9Y4L5 304 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 TRAPPC1Q9Y5R8 145 aa12.54□□□□□ -0.4
COL6A2-201ENST00000300527 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 IGKV1-6A0A0C4DH72 117 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 A0A0J9YW62 118 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 TRAPPC6AO75865 159 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 IGKV1D-33P01593 117 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 IGKV1-33P01594 117 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 CCL3P10147 92 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 SLC23A3Q6PIS1 610 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 AAED1Q7RTV5 226 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
COL6A2-201ENST00000300527 DCAF16Q9NXF7 216 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 GOLT1BQ9Y3E0 138 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 HRASP01112 189 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 SLC38A11Q08AI6 406 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 RPP25LQ8N5L8 163 aaKnown RBP12.53□□□□□ -0.4
COL6A2-201ENST00000300527 OR10J5Q8NHC4 309 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 SRXN1Q9BYN0 137 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 OR1A1Q9P1Q5 309 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 RNF150Q9ULK6 438 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 TP53I11O14683 189 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 CEACAM1P13688 526 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 CNN1P51911 297 aaKnown RBP12.53□□□□□ -0.4
COL6A2-201ENST00000300527 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 PARD6AQ9NPB6 346 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 SEMA5BQ9P283 1151 aa12.53□□□□□ -0.4
COL6A2-201ENST00000300527 KBTBD11O94819 623 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 EDN3P14138 238 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 OTX1P32242 354 aaPredicted RBP12.52□□□□□ -0.4
COL6A2-201ENST00000300527 TFPI2P48307 235 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 CYP2G1PQ6ZSU1 146 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 RAB40CQ96S21 281 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 TMEM242Q9NWH2 141 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 CRIM1Q9NZV1 1036 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 NAGKQ9UJ70 344 aa12.52□□□□□ -0.4
COL6A2-201ENST00000300527 POLR3KQ9Y2Y1 108 aaPredicted RBP12.52□□□□□ -0.4
COL6A2-201ENST00000300527 SYNGR3O43761 229 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 NUPR1O60356 82 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 FAM27BQ5VT28 67 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 DBX2Q6ZNG2 339 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 HAPLN4Q86UW8 402 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 PSMF1Q92530 271 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 FRYLO94915 3013 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 TRAPPC2LH3BP13 241 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 CXCL13O43927 109 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 DPPA3Q6W0C5 159 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 BEND2Q8NDZ0 799 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 TMEM170AQ8WVE7 144 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 C10orf35Q96D05 121 aa12.52□□□□□ -0.41
COL6A2-201ENST00000300527 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
COL6A2-201ENST00000300527 B4E171 279 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 SYNGR1O43759 233 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 NTF4P34130 210 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 TSPAN7P41732 249 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 ERVFC1-1P60608 527 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 SHHQ15465 462 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 DNLZQ5SXM8 178 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 C10orf128Q5T292 105 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 C20orf204Q6ZNR8 217 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 ZNF295-AS1Q8N0V1 137 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 OR5D13Q8NGL4 314 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
COL6A2-201ENST00000300527 TMEM54Q969K7 222 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 TCFL5Q9UL49 500 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 KRASP01116 189 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 CRYGSP22914 178 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 TDGF1P3P51864 188 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 FFAR4Q5NUL3 377 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 OR10G9Q8NGN4 311 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 OR10G7Q8NGN6 311 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
COL6A2-201ENST00000300527 IMMP2LQ96T52 175 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 FAM103A1Q9BTL3 118 aaKnown RBP12.51□□□□□ -0.41
COL6A2-201ENST00000300527 TMEM208Q9BTX3 173 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 VPS13AQ96RL7 3174 aa12.51□□□□□ -0.41
COL6A2-201ENST00000300527 IGHV1OR15-9A0A0B4J2B8 117 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 H0Y980 276 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 GCH1P30793 250 aa12.5□□□□□ -0.41
COL6A2-201ENST00000300527 MPLP40238 635 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms