RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 BCL2L14Q9BZR8 327 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 UFSP2Q9NUQ7 469 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 MLXQ9UH92 298 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 STRAPQ9Y3F4 350 aaKnown RBP15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 CACNA1DQ01668 2161 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 HAND1O96004 215 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 RAB5CP51148 216 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 FABP6P51161 128 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 TMEM267Q0VDI3 215 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 PEA15Q15121 130 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 GUSBP1Q15486 140 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 ALKBH2Q6NS38 261 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 RARRES2Q99969 163 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 SAV1Q9H4B6 383 aaPredicted RBP15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 MSL2Q9HCI7 577 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 CACNG5Q9UF02 275 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 RNF150Q9ULK6 438 aa15.49■□□□□ 0.07
SHKBP1-201ENST00000291842 A6NLC8 198 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 PRAMEF6Q5VXH4 476 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 ZNF295-AS1Q8N0V1 137 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 AIFM2Q9BRQ8 373 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 TREM2Q9NZC2 230 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 OR1L1Q8NH94 360 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 RXFP4Q8TDU9 374 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 ABHD14BQ96IU4 210 aa15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 INTS1Q8N201 2190 aaKnown RBP15.48■□□□□ 0.07
SHKBP1-201ENST00000291842 TRAV17A0A0B4J275 112 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 GALR2O43603 387 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 OR13C7P0DN81 318 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 IAPPP10997 89 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 CBR1P16152 277 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 AESQ08117 197 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 MOB1BQ7L9L4 216 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 RPS10P5Q9NQ39 176 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 KPTNQ9Y664 436 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 KIAA1324LA8MWY0 1029 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 NPIPB11E5RHQ5 1161 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 IGKV1-5P01602 117 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 IGKV3-15P01624 115 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 HEXAP06865 529 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 SNRNP70P08621 437 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 CECR9P0C854 216 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 ZNF585BQ52M93 769 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 C11orf53Q8IXP5 236 aa15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 OPN3Q9H1Y3 402 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-201ENST00000291842 A0A1B0GU03 582 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 TIMM8AO60220 97 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 DAOP14920 347 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 OR3A1P47881 315 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 Q6ZR03 302 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 COMMD1Q8N668 190 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 DRAM1Q8N682 238 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 TPRX1Q8N7U7 411 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 ZNF610Q8N9Z0 462 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 OR8G5Q8NG78 346 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 CLCC1Q96S66 551 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 MBNL3Q9NUK0 354 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 MGAQ8IWI9 3026 aa15.46■□□□□ 0.07
SHKBP1-201ENST00000291842 AQP7O14520 342 aa15.46■□□□□ 0.06
SHKBP1-201ENST00000291842 LMO1P25800 156 aa15.46■□□□□ 0.06
SHKBP1-201ENST00000291842 FLI1Q01543 452 aaPredicted RBP15.46■□□□□ 0.06
SHKBP1-201ENST00000291842 OR2B11Q5JQS5 317 aa15.46■□□□□ 0.06
SHKBP1-201ENST00000291842 IGFL2Q6UWQ7 119 aa15.46■□□□□ 0.06
SHKBP1-201ENST00000291842 ZFP82Q8N141 532 aa15.46■□□□□ 0.06
SHKBP1-201ENST00000291842 WIPI2Q9Y4P8 454 aa15.46■□□□□ 0.06
SHKBP1-201ENST00000291842 M0R036 132 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 TXNL1O43396 289 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 CRYBA1P05813 215 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 BAXQ07812 192 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 HMGN3Q15651 99 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 AWAT1Q58HT5 328 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 OR52L2PQ8NGH6 319 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 CD300LFQ8TDQ1 290 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 SARAFQ96BY9 339 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 TAAR6Q96RI8 345 aa15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 HEATR1Q9H583 2144 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-201ENST00000291842 UMAD1C9J7I0 102 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 COX5AP20674 150 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 ZNF808Q8N4W9 903 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 METRNQ9UJH8 293 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 TMEM210A6NLX4 147 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 C12orf77C9JDV5 145 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 MMP9P14780 707 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 ACSF3Q4G176 576 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 SHEQ5VZ18 495 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 STX12Q86Y82 276 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 C2CD4CQ8TF44 421 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 C14orf79Q96F83 325 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 ATP5SQ99766 215 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 HES4Q9HCC6 221 aa15.44■□□□□ 0.06
SHKBP1-201ENST00000291842 PRR33A8MZF0 331 aa15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 PTBP3O95758 552 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 RPL23AP62750 156 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 SPSB3Q6PJ21 355 aa15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 THNSL2Q86YJ6 484 aa15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 MRGPRDQ8TDS7 321 aa15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 PBDC1Q9BVG4 233 aa15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 KCNIP1Q9NZI2 227 aa15.43■□□□□ 0.06
SHKBP1-201ENST00000291842 PRELID3BQ9Y3B1 194 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms