RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RNFT1Q5M7Z0 435 aa21.21■□□□□ 0.99
ROM1-201ENST00000278833 STX12Q86Y82 276 aa21.21■□□□□ 0.99
ROM1-201ENST00000278833 SCCPDHQ8NBX0 429 aa21.21■□□□□ 0.99
ROM1-201ENST00000278833 C14orf79Q96F83 325 aa21.21■□□□□ 0.99
ROM1-201ENST00000278833 CLCC1Q96S66 551 aa21.21■□□□□ 0.99
ROM1-201ENST00000278833 DEFB127Q9H1M4 99 aa21.21■□□□□ 0.99
ROM1-201ENST00000278833 LIN7CQ9NUP9 197 aaKnown RBP21.21■□□□□ 0.99
ROM1-201ENST00000278833 TPRP12270 2363 aaKnown RBP21.21■□□□□ 0.99
ROM1-201ENST00000278833 ZNF407Q9C0G0 2248 aa21.21■□□□□ 0.99
ROM1-201ENST00000278833 MED13Q9UHV7 2174 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 TRAV1-1A0A0B4J248 108 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 OR2H2O95918 312 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 IGHG3P01860 377 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 PTAFRP25105 342 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 GUSBP1Q15486 140 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 GPHA2Q96T91 129 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 HES4Q9HCC6 221 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 C1QTNF9BB2RNN3 333 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 HBE1P02100 147 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 PSG2P11465 335 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 ASCL1P50553 236 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 ACSF3Q4G176 576 aaPredicted RBP21.2■□□□□ 0.98
ROM1-201ENST00000278833 INO80CQ6PI98 192 aaPredicted RBP21.2■□□□□ 0.98
ROM1-201ENST00000278833 RBMXL1Q96E39 390 aaKnown RBP21.2■□□□□ 0.98
ROM1-201ENST00000278833 MALSU1Q96EH3 234 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 CDH20Q9HBT6 801 aa21.2■□□□□ 0.98
ROM1-201ENST00000278833 RBFOX3A6NFN3 312 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 TNFSF12O43508 249 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 C1QTNF9P0C862 333 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 HABP2Q14520 560 aaPredicted RBP21.19■□□□□ 0.98
ROM1-201ENST00000278833 MSMO1Q15800 293 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 PARD6GQ9BYG4 376 aaPredicted RBP21.19■□□□□ 0.98
ROM1-201ENST00000278833 TOLLIPQ9H0E2 274 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 OR1A1Q9P1Q5 309 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 FBXO7Q9Y3I1 522 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 ESPL1Q14674 2120 aa21.19■□□□□ 0.98
ROM1-201ENST00000278833 CFAP47Q6ZTR5 3102 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 IGKV1-39P01597 117 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 IGKV1D-39P04432 117 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 OR8U8P0C7N1 319 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 OMGP23515 440 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 ARG2P78540 354 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 DNAJC13O75165 2243 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 A0A1W2PR80 420 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 CST7O76096 145 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 EPHA1P21709 976 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 IGHV1-2P23083 117 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 ZNF506Q5JVG8 444 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 ETV3LQ6ZN32 361 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 ZBTB34Q8NCN2 500 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 COA4Q9NYJ1 87 aa21.18■□□□□ 0.98
ROM1-201ENST00000278833 FAM90A26D6RGX4 464 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 SH2D1BO14796 132 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 AGAP20933 346 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 TUBG1P23258 451 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 UBE2NP61088 152 aaKnown RBP21.17■□□□□ 0.98
ROM1-201ENST00000278833 TLE4Q04727 773 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 ZNF154Q13106 437 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 AKR1C8PQ5T2L2 129 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 MYPOPQ86VE0 399 aaPredicted RBP21.17■□□□□ 0.98
ROM1-201ENST00000278833 ESRP2Q9H6T0 727 aaKnown RBP21.17■□□□□ 0.98
ROM1-201ENST00000278833 TUBG2Q9NRH3 451 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 DKK4Q9UBT3 224 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 ACACBO00763 2458 aa21.17■□□□□ 0.98
ROM1-201ENST00000278833 ARGFXA6NJG6 315 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 RNF212BA8MTL3 300 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 C1orf196B1AJZ1 125 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 HSPB1P04792 205 aaKnown RBP21.16■□□□□ 0.98
ROM1-201ENST00000278833 SNRNP70P08621 437 aaKnown RBP21.16■□□□□ 0.98
ROM1-201ENST00000278833 TNFSF10P50591 281 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 SPATA46Q5T0L3 261 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 UNQ6494/PRO21346Q6UXR6 183 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 IQCF2Q8IXL9 164 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 C1orf162Q8NEQ5 155 aaPredicted RBP21.16■□□□□ 0.98
ROM1-201ENST00000278833 OR10G4Q8NGN3 311 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 OR51H1Q8NH63 302 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 OR2J1Q9GZK6 312 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 OR51B6Q9H340 312 aa21.16■□□□□ 0.98
ROM1-201ENST00000278833 RAB2AP61019 212 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 SOHLH1Q5JUK2 328 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 FIP1L1Q6UN15 594 aaKnown RBP21.15■□□□□ 0.98
ROM1-201ENST00000278833 P4HA3Q7Z4N8 544 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 ZNF561Q8N587 486 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 PSMG3Q9BT73 122 aaPredicted RBP21.15■□□□□ 0.98
ROM1-201ENST00000278833 RNF150Q9ULK6 438 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 M0R036 132 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 SIRPB1O00241 398 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 IGKV1-5P01602 117 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 CELA3BP08861 270 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 Q6ZT83 130 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 ABHD14AQ9BUJ0 271 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 TRAPPC2LQ9UL33 140 aa21.15■□□□□ 0.98
ROM1-201ENST00000278833 URB1O60287 2271 aaKnown RBP21.15■□□□□ 0.98
ROM1-201ENST00000278833 ZNF98A6NK75 572 aa21.14■□□□□ 0.97
ROM1-201ENST00000278833 SYNGR2O43760 224 aa21.14■□□□□ 0.97
ROM1-201ENST00000278833 IFNA5P01569 189 aa21.14■□□□□ 0.97
ROM1-201ENST00000278833 SRP19P09132 144 aaKnown RBP21.14■□□□□ 0.97
ROM1-201ENST00000278833 ZNF585BQ52M93 769 aa21.14■□□□□ 0.97
ROM1-201ENST00000278833 SLC25A40Q8TBP6 338 aa21.14■□□□□ 0.97
ROM1-201ENST00000278833 SFT2D1Q8WV19 159 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms