RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 C1QTNF5Q9BXJ0 243 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 OR14J1Q9UGF5 321 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 KIAA1324LA8MWY0 1029 aaPredicted RBP15.3■□□□□ 0.04
TRAF4-201ENST00000262395 IL2RGP31785 369 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 MLF1P58340 268 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 SPCS3P61009 180 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 RTP5Q14D33 572 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 TRIM61Q5EBN2 209 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 MKXQ8IYA7 352 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 KIR2DS1A0A191URI9 304 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 SMCO3A2RU48 225 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 OTX2P32243 289 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 KIR2DS4P43632 304 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 KIR2DS1Q14954 304 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 AGBL5Q8NDL9 886 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 OR5T1Q8NG75 326 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 OR2V1Q8NHB1 315 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 MRPL30Q8TCC3 161 aaKnown RBP15.3■□□□□ 0.04
TRAF4-201ENST00000262395 CLDN23Q96B33 292 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 SH2D2AQ9NP31 389 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 DEPPQ9NTK1 212 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 CISD1Q9NZ45 108 aaKnown RBP15.3■□□□□ 0.04
TRAF4-201ENST00000262395 ZNF391Q9UJN7 358 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 KCNS2Q9ULS6 477 aa15.3■□□□□ 0.04
TRAF4-201ENST00000262395 ELOA3CA0A087WX78 387 aaPredicted RBP15.29■□□□□ 0.04
TRAF4-201ENST00000262395 GDF1P27539 372 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 ZDHHC23Q8IYP9 409 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 OR4X1Q8NH49 305 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 PSMF1Q92530 271 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 DNAJC13O75165 2243 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 UBE2L5PA0A1B0GUS4 154 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 PINLYPA6NC86 204 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 CD300LBA8K4G0 201 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 SYNGR2O43760 224 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 G0S2P27469 103 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 VASH2Q86V25 355 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 ZNF525Q8N782 197 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 ABHD14BQ96IU4 210 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 OR2W1Q9Y3N9 320 aa15.29■□□□□ 0.04
TRAF4-201ENST00000262395 MDH2P40926 338 aaKnown RBP15.28■□□□□ 0.04
TRAF4-201ENST00000262395 ZNF324BQ6AW86 544 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-201ENST00000262395 GATAD1Q8WUU5 269 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 SMIM7Q9BQ49 75 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 ATG101Q9BSB4 218 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 PHF7Q9BWX1 381 aaPredicted RBP15.28■□□□□ 0.04
TRAF4-201ENST00000262395 PLA2G3Q9NZ20 509 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 TCFL5Q9UL49 500 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 LAMP3Q9UQV4 416 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 MAP1LC3B2A6NCE7 125 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 B4DEV8 164 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 WDR1O75083 606 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 DEFA4P12838 97 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 SRD5A2P31213 254 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 COL10A1Q03692 680 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 C16orf82Q7Z2V1 217 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 OR13D1Q8NGV5 346 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 SPSB4Q96A44 273 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 OR4C12Q96R67 309 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 ELOVL1Q9BW60 279 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 REPIN1Q9BWE0 567 aaKnown RBP15.28■□□□□ 0.04
TRAF4-201ENST00000262395 MAP1LC3BQ9GZQ8 125 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 PRDM6Q9NQX0 595 aa15.28■□□□□ 0.04
TRAF4-201ENST00000262395 C9J4A7 227 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 MRPL33O75394 65 aaKnown RBP15.27■□□□□ 0.04
TRAF4-201ENST00000262395 RHBDL1O75783 438 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 IGKV1-5P01602 117 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 OR8G1Q15617 311 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 M1APQ8TC57 530 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 IFI44Q8TCB0 444 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 WDR54Q9H977 334 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 CACNA1DQ01668 2161 aa15.27■□□□□ 0.04
TRAF4-201ENST00000262395 TRAV24A0A0B4J272 114 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 ZNF737O75373 536 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 IGKV1D-33P01593 117 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 IGKV1-33P01594 117 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 CEACAM21Q3KPI0 293 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 SAP25Q8TEE9 199 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 LHX4Q969G2 390 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 RAB40CQ96S21 281 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 MUC3AQ02505 3323 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 DUXBA0A1W2PPF3 345 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 LRRC3CA6NJW4 275 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 ZNF705GA8MUZ8 300 aaPredicted RBP15.27■□□□□ 0.03
TRAF4-201ENST00000262395 GALR2O43603 387 aaPredicted RBP15.27■□□□□ 0.03
TRAF4-201ENST00000262395 BMP5P22003 454 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 RND2P52198 227 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 P2RY6Q15077 328 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 PRSS8Q16651 343 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 SPATA46Q5T0L3 261 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 DPPA3Q6W0C5 159 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 WFIKKN1Q96NZ8 548 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 SLC25A22Q9H936 323 aa15.27■□□□□ 0.03
TRAF4-201ENST00000262395 MRPS17Q9Y2R5 130 aaKnown RBP15.27■□□□□ 0.03
TRAF4-201ENST00000262395 AHCTF1Q8WYP5 2266 aa15.26■□□□□ 0.03
TRAF4-201ENST00000262395 TRAV1-1A0A0B4J248 108 aa15.26■□□□□ 0.03
TRAF4-201ENST00000262395 GZMHP20718 246 aa15.26■□□□□ 0.03
TRAF4-201ENST00000262395 S100GP29377 79 aa15.26■□□□□ 0.03
TRAF4-201ENST00000262395 Q6ZS49 121 aa15.26■□□□□ 0.03
TRAF4-201ENST00000262395 TMEM68Q96MH6 324 aa15.26■□□□□ 0.03
TRAF4-201ENST00000262395 HIST1H2AAQ96QV6 131 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms