RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Gm5798F7BTS7 198 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Zfp955bL7N232 545 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Mesp2O08574 370 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Atpif1O35143 106 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 NppaP05125 152 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 MgmtP26187 211 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Mep1aP28825 747 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 ElnP54320 860 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Vmn1r223Q5SSA0 361 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Olfr1031Q7TR87 336 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Q80X32 188 aaKnown RBP12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Nmnat2Q8BNJ3 307 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 SdhaQ8K2B3 664 aaKnown RBP12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Fam110aQ8R184 296 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Olfr95Q8VFE2 312 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Olfr992Q8VGC6 309 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 DapQ91XC8 102 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 SdhdQ9CXV1 159 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Lingo1Q9D1T0 614 aa12.71□□□□□ -0.37
Nup88-202ENSMUST00000108530 Ighv7-1A0A075B5S2 121 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Sirpb1bA0A0A6YXN8 397 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 6430628N08RikA0A0U1RQ45 177 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1179A2AUS6 307 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Sirpb1cK7N6K7 397 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr194L7N1Y8 306 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr203L7N205 307 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Dkk1O54908 272 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 H2-Ab1P01921 265 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Pcnx2Q5DU28 2122 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ap1s3Q7TN05 154 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1219Q7TR04 311 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Znhit1Q8R331 154 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr469Q8VF66 314 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1309Q8VF83 320 aa12.71□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm10778A0A087WNP5 499 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm4175D3YTW8 314 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Emg1O35130 244 aaKnown RBP12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Bcl6bO88282 474 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp27P10077 819 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rag2P21784 527 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Slc6a1P31648 599 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ap2s1P62743 142 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tob1Q61471 362 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp819Q80V81 607 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 NracQ8BNX7 165 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Sec14l4Q8R0F9 403 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 SccpdhQ8R127 429 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tctn3Q8R2Q6 595 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Mib2Q8R516 973 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr995Q8VF74 315 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr1260Q8VGN9 310 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfand2bQ91X58 257 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp61Q923D1 555 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Loxl4Q924C6 757 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Fbxw4Q9JMJ2 410 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Shank1D3YZU1 2167 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Trank1Q8BV79 2999 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp334A2A4U6 679 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm572B1ARY8 399 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr568E9Q554 313 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm21789J3QMZ1 123 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm21870J3QPN2 123 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm21883J3QPV3 123 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ccr6O54689 367 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tcte3P11985 191 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gsx2P31316 305 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 UbdP63072 162 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 LipnQ3U4B4 400 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Clns1aQ61189 236 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Alkal2Q80UG6 151 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Glrx5Q80Y14 152 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Tm2d3Q8BJ83 261 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Plcxd1Q8CHS4 345 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Arv1Q9D0U9 266 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Lmntd1Q9D4C1 413 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 DiabloQ9JIQ3 237 aa12.7□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm35060A0A140LIV7 231 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Zfp69A2A761 587 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 H2-EaP01904 255 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 CfdP03953 259 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 P04224 255 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 RorcP51450 516 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Xlr4cQ3TKR2 215 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 2900092C05RikQ5I0V9 184 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 IslrQ6GU68 428 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rtn4rl2Q7M6Z0 420 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Nsun5Q8K4F6 465 aaKnown RBP12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Olfr734Q8VFT4 313 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 CstadQ9D245 104 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Elp4Q9ER73 422 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Xlr4bQ9JJQ7 215 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Igkv4-80A0A075B5L7 116 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm45716A0A1B0GRQ0 93 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Ube2ql1A0PJN4 161 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 FggyA2AJL3 552 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Rd3lB2RV38 197 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 C2cd4aE9Q861 334 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm21863J3KMP8 111 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Gm21767J3QPV5 180 aa12.69□□□□□ -0.38
Nup88-202ENSMUST00000108530 Vmn1r57K7N731 310 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms