RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 C14orf79Q96F83 325 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 C2orf50Q96LR7 162 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 CHIAQ9BZP6 476 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 METTL8Q9H825 291 aaKnown RBP8.15□□□□□ -1.1
PHGDH-215ENST00000641371 FAM212BQ9NTI7 297 aaPredicted RBP8.15□□□□□ -1.1
PHGDH-215ENST00000641371 KIF25Q9UIL4 384 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 JPT1Q9UK76 154 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 TMED3Q9Y3Q3 217 aa8.15□□□□□ -1.1
PHGDH-215ENST00000641371 SPENQ96T58 3664 aaKnown RBP8.15□□□□□ -1.1
PHGDH-215ENST00000641371 IGKV1D-17A0A075B6S4 117 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 PPIAL4EA0A075B759 164 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 ODAMA1E959 279 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 PPIAL4DF5H284 164 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 H0Y980 276 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 ATG12O94817 140 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 PPIAL4FP0DN26 164 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 RPA2P15927 270 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 EGR1P18146 543 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 RCC1P18754 421 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-215ENST00000641371 H2BFSP57053 126 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 MEF2CQ06413 473 aaPredicted RBP8.14□□□□□ -1.11
PHGDH-215ENST00000641371 HERPUD1Q15011 391 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 SLC9A3R2Q15599 337 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 NDUFA5Q16718 116 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 SWI5Q1ZZU3 235 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 C20orf204Q6ZNR8 217 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 Q6ZPA2 131 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF788Q6ZQV5 615 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 LIAT1Q6ZQX7 453 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 LDLRAD3Q86YD5 345 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 CD177Q8N6Q3 437 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 OR10A7Q8NGE5 316 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 THAP6Q8TBB0 222 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 SECTM1Q8WVN6 248 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 IL1F10Q8WWZ1 152 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 RAB39BQ96DA2 213 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 COQ2Q96H96 371 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 ABHD14BQ96IU4 210 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 SHARPINQ9H0F6 387 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 RAB1BQ9H0U4 201 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 TMEM106BQ9NUM4 274 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 LIN7CQ9NUP9 197 aaKnown RBP8.14□□□□□ -1.11
PHGDH-215ENST00000641371 PPIAL4AQ9Y536 164 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 HSPB11Q9Y547 144 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 RBM7Q9Y580 266 aaKnown RBP8.14□□□□□ -1.11
PHGDH-215ENST00000641371 PKD1L2Q7Z442 2459 aa8.14□□□□□ -1.11
PHGDH-215ENST00000641371 TRGV10A0A0A0MS01 117 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 IGKV1-6A0A0C4DH72 117 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 A0A0D9SG52 128 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 IGHV3-64DA0A0J9YX35 117 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 C3orf85A0A1B0GTC6 90 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 DEFB108AA8MXU0 73 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 C12orf77C9JDV5 145 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 TMEM178BH3BS89 294 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 GPR37O15354 613 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 OR2F2O95006 317 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 HBZP02008 142 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 PI3P19957 117 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 PSMB6P28072 239 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 GNRHRP30968 328 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 NUP62P37198 522 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-215ENST00000641371 RAB7AP51149 207 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 NKX2-5P52952 324 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-215ENST00000641371 AESQ08117 197 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 OR2F1Q13607 317 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF345Q14585 488 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 TMEM187Q14656 261 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 SMCO1Q147U7 214 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 HFEQ30201 348 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 Q3ZCU0 254 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 C11orf87Q6NUJ2 197 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF767PQ75MW2 155 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 C9orf62Q8N4C0 152 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 BOLLQ8N9W6 283 aaKnown RBP8.13□□□□□ -1.11
PHGDH-215ENST00000641371 NEU4Q8WWR8 484 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-215ENST00000641371 ITLN2Q8WWU7 325 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-215ENST00000641371 CORO2AQ92828 525 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 LIME1Q9H400 295 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 CBLN4Q9NTU7 201 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 RDH8Q9NYR8 311 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 TAS2R3Q9NYW6 316 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 KAAG1Q9UBP8 84 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 LAMP3Q9UQV4 416 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 UBE2J1Q9Y385 318 aaPredicted RBP8.13□□□□□ -1.11
PHGDH-215ENST00000641371 ICE1Q9Y2F5 2266 aa8.13□□□□□ -1.11
PHGDH-215ENST00000641371 IGHV1-69-2A0A0G2JMI3 117 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 hADV38S2A0JD32 116 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 ZNF729A6NN14 1252 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-215ENST00000641371 FAM25EA8MYX2 175 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 L7N2F9 121 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 F2RL2O00254 374 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 PHF1O43189 567 aaPredicted RBP8.12□□□□□ -1.11
PHGDH-215ENST00000641371 YPEL1O60688 119 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 CDS2O95674 445 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 RLN2P04090 185 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 OR5AC1P0C628 307 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 SLC25A6P12236 298 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 GNLYP22749 145 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 UCP1P25874 307 aa8.12□□□□□ -1.11
PHGDH-215ENST00000641371 CD80P33681 288 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms