RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 UCN2Q96RP3 112 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 UBE2L5PA0A1B0GUS4 154 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 MAP1LC3B2A6NCE7 125 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 KIAA1324LA8MWY0 1029 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 DHRS3O75911 302 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 CFIP05156 583 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 CDKN1AP38936 164 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF41P51814 821 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 DPPA3Q6W0C5 159 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 SELENOHQ8IZQ5 122 aaKnown RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 DDIT4LQ96D03 193 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 BORCS8Q96FH0 119 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 SGCZQ96LD1 299 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 MAP1LC3BQ9GZQ8 125 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 SRD5A3Q9H8P0 318 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 USF3Q68DE3 2245 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 RPLP1P05386 114 aaKnown RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 TAS2R30P59541 319 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 IQCJQ1A5X6 159 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 TMEM241Q24JQ0 296 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 RSPO1Q2MKA7 263 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 LBHQ53QV2 105 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 THEM4Q5T1C6 240 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 Q6ZRM9 215 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 MRPL13Q9BYD1 178 aaKnown RBP11.82□□□□□ -0.52
SCARB2-227ENST00000640957 NAGKQ9UJ70 344 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 SELENOKQ9Y6D0 94 aa11.82□□□□□ -0.52
SCARB2-227ENST00000640957 PFN1P07737 140 aaKnown RBP11.81□□□□□ -0.52
SCARB2-227ENST00000640957 RPL23P62829 140 aaKnown RBP11.81□□□□□ -0.52
SCARB2-227ENST00000640957 C9orf135Q5VTT2 229 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 OR10G3Q8NGC4 313 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 DOCK10Q96BY6 2186 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 CD27P26842 260 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 PAX9P55771 341 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 RAB4BP61018 213 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 SLC25A26Q70HW3 274 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 GNPNAT1Q96EK6 184 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-227ENST00000640957 ATP5SQ99766 215 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 TMEM222Q9H0R3 208 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 SLC39A9Q9NUM3 307 aa11.81□□□□□ -0.52
SCARB2-227ENST00000640957 IGKV1D-33P01593 117 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 IGKV1-33P01594 117 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 GALNSP34059 522 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 C11orf42Q8N5U0 333 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 OR10V1Q8NGI7 309 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 DERL1Q9BUN8 251 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 FOXJ2Q9P0K8 574 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 TRBV24-1A0A075B6N3 115 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 F2Z2F3 143 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 TRAF3IP2O43734 574 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-227ENST00000640957 FRMD6-AS1P0C7T7 363 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 CCL2P13500 99 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 THBS3P49746 956 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 CD81P60033 236 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 ENDOGQ14249 297 aaKnown RBP11.8□□□□□ -0.52
SCARB2-227ENST00000640957 BEND2Q8NDZ0 799 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 PARLQ9H300 379 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 AKIRIN1Q9H9L7 192 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-227ENST00000640957 LPAR2Q9HBW0 351 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 IGHV1OR21-1A0A087WYE8 117 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 LILRA1O75019 489 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 IGHMP01871 453 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 HBE1P02100 147 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 PAX1P15863 534 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 FASLGP48023 281 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 CCR5P51681 352 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 RND2P52198 227 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 MMDQ15546 238 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 ALKBH2Q6NS38 261 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 ATOH7Q8N100 152 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 ST6GALNAC3Q8NDV1 305 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 OR1N1Q8NGS0 311 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 SIGLEC12Q96PQ1 595 aa11.8□□□□□ -0.52
SCARB2-227ENST00000640957 NUDT16L1Q9BRJ7 211 aaKnown RBP11.8□□□□□ -0.52
SCARB2-227ENST00000640957 RBM7Q9Y580 266 aaKnown RBP11.8□□□□□ -0.52
SCARB2-227ENST00000640957 THADAQ6YHU6 1953 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 A0A1B0GW64 132 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 PDGFBP01127 241 aaPredicted RBP11.79□□□□□ -0.52
SCARB2-227ENST00000640957 GCGP01275 180 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 PSG2P11465 335 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 OR2T10Q8NGZ9 312 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 CCDC74BQ96LY2 380 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 OR51B6Q9H340 312 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 OR51I2Q9H344 312 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 DNAJC4Q9NNZ3 241 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 PPP1R3CQ9UQK1 317 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 RNF24Q9Y225 148 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 TRAPPC1Q9Y5R8 145 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 ZNF318Q5VUA4 2279 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 A0A1B0GX78 115 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 B4E171 279 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 HS3ST1O14792 307 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 TSPAN7P41732 249 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 TMEM41BQ5BJD5 291 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 CCDC71LQ8N9Z2 235 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 RNASE8Q8TDE3 154 aaKnown RBP11.79□□□□□ -0.52
SCARB2-227ENST00000640957 MOB3AQ96BX8 217 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 TAAR3PQ9P1P4 343 aa11.79□□□□□ -0.52
SCARB2-227ENST00000640957 CACNG5Q9UF02 275 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms