RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 STEAP3Q658P3 488 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 RAB12Q6IQ22 244 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 LYPD6Q86Y78 171 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 C5orf56Q8N8D9 126 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 CHPT1Q8WUD6 406 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 TFAP2CQ92754 450 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 NECAP2Q9NVZ3 263 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 ETAA1Q9NY74 926 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 PEX16Q9Y5Y5 336 aa15.14■□□□□ 0.01
CCDC28A-203ENST00000617445 PSMB11A5LHX3 300 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 TXNL1O43396 289 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 SC5DO75845 299 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 IGKV1D-33P01593 117 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 IGKV1-33P01594 117 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 MGMTP16455 207 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 SYT6Q5T7P8 510 aaPredicted RBP15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 MOB3BQ86TA1 216 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 ZNF554Q86TJ5 538 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 IZUMO1Q8IYV9 350 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 MND1Q9BWT6 205 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 SELENOIQ9C0D9 397 aa15.13■□□□□ 0.01
CCDC28A-203ENST00000617445 A0A1W2PPE3 182 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 SH2D7A6NKC9 451 aaPredicted RBP15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 PIN1P1O15428 100 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 CRTAPO75718 401 aaPredicted RBP15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 PF4P02776 101 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 CDK1P06493 297 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 UBBP0CG47 229 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 CD1BP29016 333 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 HNF4GQ14541 408 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 TGIF2LXQ8IUE1 241 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 COMMD1Q8N668 190 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 OR2T10Q8NGZ9 312 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 SGCDQ92629 289 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 ST6GALNAC6Q969X2 333 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 Q96M66 194 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 CST11Q9H112 138 aa15.12■□□□□ 0.01
CCDC28A-203ENST00000617445 C12orf77C9JDV5 145 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 DUS4LO95620 317 aaKnown RBP15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 IGHG2P01859 326 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 SLC6A1P30531 599 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 ZNF137PP52743 207 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 GPR50Q13585 617 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 UNQ9370/PRO34162Q6UXP9 181 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 SLC25A48Q6ZT89 311 aaKnown RBP15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 PHYHIPQ92561 330 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 BANF2Q9H503 90 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 SCN3BQ9NY72 215 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 KCNIP1Q9NZI2 227 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 GNG12Q9UBI6 72 aa15.11■□□□□ 0.01
CCDC28A-203ENST00000617445 SERPINE3A8MV23 424 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 H0YHG0 523 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 HBZP02008 142 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 SLC35A2P78381 396 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 SLC35B1P78383 322 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 ACSM3Q53FZ2 586 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 KHDC1LQ5JSQ8 128 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 C6orf141Q5SZD1 244 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 GLT8D1Q68CQ7 371 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 FOXRED2Q8IWF2 684 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 TMEM104Q8NE00 496 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 OR51D1Q8NGF3 324 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 OR8H1Q8NGG4 311 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 OR4K15Q8NH41 348 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 RTN4IP1Q8WWV3 396 aaPredicted RBP15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 PHF21AQ96BD5 680 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 RCC1LQ96I51 464 aaKnown RBP15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 EAF1Q96JC9 268 aaPredicted RBP15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 GON7Q9BXV9 100 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 ZFP57Q9NU63 452 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 MBNL3Q9NUK0 354 aaKnown RBP15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 NKX1-2Q9UD57 310 aaPredicted RBP15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 LRRC42Q9Y546 428 aa15.1■□□□□ 0.01
CCDC28A-203ENST00000617445 NCBP2LA6PVI3 153 aaKnown RBP15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 PDCD6O75340 191 aa15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 REG1BP48304 166 aa15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 SPHARQ15513 63 aa15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 SLC35E3Q7Z769 313 aa15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 Q8N6K4 173 aa15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 ZNF439Q8NDP4 499 aa15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 UBALD1Q8TB05 177 aa15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 LIN7CQ9NUP9 197 aaKnown RBP15.09■□□□□ 0.01
CCDC28A-203ENST00000617445 IGHV3-43A0A0B4J1X8 118 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 ERICH4A6NGS2 130 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 PTGES3LE9PB15 166 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 MOSP00540 346 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 IGHV3-43DP0DP04 118 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 SIGIRRQ6IA17 410 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 C10orf99Q6UWK7 81 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 Q6ZPA2 131 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 GPR61Q9BZJ8 451 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 ABCG5Q9H222 651 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 TAF9BQ9HBM6 251 aa15.08■□□□□ 0
CCDC28A-203ENST00000617445 UBE2QL1A1L167 161 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 AP4M1O00189 453 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 IGLL1P15814 213 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 RCC1P18754 421 aaPredicted RBP15.07■□□□□ 0
CCDC28A-203ENST00000617445 RPL23AP62750 156 aaKnown RBP15.07■□□□□ 0
CCDC28A-203ENST00000617445 HTD2P86397 168 aa15.07■□□□□ 0
CCDC28A-203ENST00000617445 CT45A1Q5HYN5 189 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms