RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF486Q96H40 463 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-205ENST00000588745 RSRP1Q9BUV0 290 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OPN4Q9UHM6 478 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 OR2W1Q9Y3N9 320 aa9.5□□□□□ -0.89
SMAD4-205ENST00000588745 HRNRQ86YZ3 2850 aaPredicted RBP9.5□□□□□ -0.89
SMAD4-205ENST00000588745 KMT2BQ9UMN6 2715 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-205ENST00000588745 IGKV1D-13A0A0B4J2D9 117 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 CRYM-AS1A6NIL9 109 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 GOSR2O14653 212 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 TMPRSS2O15393 492 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 HSPA12AO43301 675 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 RP2O75695 350 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 DUS4LO95620 317 aaKnown RBP9.49□□□□□ -0.89
SMAD4-205ENST00000588745 IGKV1-13P0DP09 117 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 IL2RGP31785 369 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 SSTR5P35346 364 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 EIF2B2P49770 351 aaKnown RBP9.49□□□□□ -0.89
SMAD4-205ENST00000588745 PIGPP57054 158 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 SUPT4H1P63272 117 aaKnown RBP9.49□□□□□ -0.89
SMAD4-205ENST00000588745 KCNJ8Q15842 424 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 C11orf91Q3C1V1 193 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 LPCAT3Q6P1A2 487 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 CLEC18BQ6UXF7 455 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 ZNF565Q8N9K5 539 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 CASTOR1Q8WTX7 329 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 GALMQ96C23 342 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 C14orf79Q96F83 325 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 DMRTB1Q96MA1 342 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 PHB2Q99623 299 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 SPOCK3Q9BQ16 436 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 DCTN5Q9BTE1 182 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 ZNF436Q9C0F3 470 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-205ENST00000588745 CLEC4MQ9H2X3 399 aaPredicted RBP9.49□□□□□ -0.89
SMAD4-205ENST00000588745 DLL4Q9NR61 685 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 SLC2A9Q9NRM0 540 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 OR6C3Q9NZP0 311 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 LAMP3Q9UQV4 416 aa9.49□□□□□ -0.89
SMAD4-205ENST00000588745 USP9XQ93008 2570 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-205ENST00000588745 C15orf65H3BRN8 121 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 TNFRSF13BO14836 293 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-205ENST00000588745 SPINT2O43291 252 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 NDUFA2O43678 99 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 FSTL3O95633 263 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 HEXAP06865 529 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 COL8A2P25067 703 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 MRPS11P82912 194 aaKnown RBP9.48□□□□□ -0.89
SMAD4-205ENST00000588745 SLC9A3R2Q15599 337 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 CR1LQ2VPA4 569 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 ZFP69Q49AA0 526 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 PHLDA2Q53GA4 152 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 C11orf88Q6PI97 169 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 SGPP2Q8IWX5 399 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 FAM185AQ8N0U4 392 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 CCDC71LQ8N9Z2 235 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 UXS1Q8NBZ7 420 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 SECTM1Q8WVN6 248 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 ARL11Q969Q4 196 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 TMEM246Q9BRR3 403 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 SLC5A7Q9GZV3 580 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 TOLLIPQ9H0E2 274 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 NAA60Q9H7X0 242 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 RDH8Q9NYR8 311 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 KAAG1Q9UBP8 84 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 SLC25A10Q9UBX3 287 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-205ENST00000588745 MYO18BQ8IUG5 2567 aa9.48□□□□□ -0.89
SMAD4-205ENST00000588745 UBR5O95071 2799 aaPredicted RBP9.48□□□□□ -0.89
SMAD4-205ENST00000588745 TRGV10A0A0A0MS01 117 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 A0A0B4J2A0 478 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 TEX13DA0A0J9YY54 714 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-205ENST00000588745 LYNX1G3V0Z9 82 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 GPR31O00270 319 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 ADAM20O43506 726 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 SLC22A5O76082 557 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 GIPP09681 153 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-205ENST00000588745 LYNX1P0DP58 116 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 GZMHP20718 246 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 GNRHRP30968 328 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 CEACAM6P40199 344 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 RND3P61587 244 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 SRSF1Q07955 248 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMAD4-205ENST00000588745 C2orf68Q2NKX9 166 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 ZNF818PQ6ZRF7 136 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 TCF23Q7RTU1 214 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 LDLRAD3Q86YD5 345 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 OR52L2PQ8NGH6 319 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 OR10V1Q8NGI7 309 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 OR5M8Q8NGP6 311 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 COQ8AQ8NI60 647 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 RTN4IP1Q8WWV3 396 aaPredicted RBP9.47□□□□□ -0.89
SMAD4-205ENST00000588745 NINJ1Q92982 152 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 PARP12Q9H0J9 701 aaKnown RBP9.47□□□□□ -0.89
SMAD4-205ENST00000588745 RAB9BQ9NP90 201 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 CALYQ9NYX4 217 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 SHPKQ9UHJ6 478 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 JPT1Q9UK76 154 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 FLNCQ14315 2725 aa9.47□□□□□ -0.89
SMAD4-205ENST00000588745 MEX3AA1L020 520 aaKnown RBP9.46□□□□□ -0.9
SMAD4-205ENST00000588745 DBX1A6NMT0 343 aa9.46□□□□□ -0.9
SMAD4-205ENST00000588745 F2RL2O00254 374 aa9.46□□□□□ -0.9
SMAD4-205ENST00000588745 HSD17B6O14756 317 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms