RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 CXorf65A6NEN9 183 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 CCDC182A6NF36 153 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 LRRC30A6NM36 301 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 INAFM1C9JVW0 142 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 F5H5K5 113 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 LOC110117498-PIK3R3F6TDL0 507 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 M0QZK8 103 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 RER1O15258 196 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SURF4O15260 269 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 PPIHO43447 177 aaKnown RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SPRY3O43610 288 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 CD5LO43866 347 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 CCNKO75909 580 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 RGS11O94810 467 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 IFNA10P01566 189 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 IGHV3-13P01766 116 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 FABP1P07148 127 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 CTXN2P0C2S0 81 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SELEP16581 610 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 FASP25445 335 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 HSD11B1P28845 292 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 FMO3P31513 532 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 KIR3DL2P43630 455 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 COMPP49747 757 aaPredicted RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ERFP50548 548 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 FXYD6P3P58550 94 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ERVS71-1P61550 626 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ARF6P62330 175 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 CCL8P80075 99 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 TNFAIP6P98066 277 aaPredicted RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 MS4A2Q01362 244 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SPHARQ15513 63 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 FAM189A2Q15884 450 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 IZUMO4Q1ZYL8 232 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 CHRFAM7AQ494W8 412 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 AKIRIN2Q53H80 203 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SLC27A4Q6P1M0 643 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF841Q6ZN19 808 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 DNM1P46Q6ZS02 220 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 PGAP1Q75T13 922 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 LRP11Q86VZ4 500 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 COMMD2Q86X83 199 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 GID4Q8IVV7 300 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF101Q8IZC7 436 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SPAG16Q8N0X2 631 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 OR6V1Q8N148 313 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ZCCHC24Q8N2G6 241 aaKnown RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 MUC20Q8N307 709 aaPredicted RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SLC26A10Q8NG04 563 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 OR4A4PQ8NGN8 299 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 OR9Q1Q8NGQ5 310 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 OR1F12Q8NHA8 337 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 KLF14Q8TD94 323 aaPredicted RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 GTF3AQ92664 365 aaKnown RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 APOBEC3DQ96AK3 386 aaPredicted RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ATF6BQ99941 703 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 COPS4Q9BT78 406 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 TMED9Q9BVK6 235 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 PARD6GQ9BYG4 376 aaPredicted RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 SHARPINQ9H0F6 387 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 METTL9Q9H1A3 318 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 Q9N2K0 584 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 ZFP57Q9NU63 452 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 RAB26Q9ULW5 256 aa3.89□□□□□ -1.79
ZNF540-204ENST00000586792 NOP16Q9Y3C1 178 aaKnown RBP3.89□□□□□ -1.79
ZNF540-204ENST00000586792 IGLV1-36A0A0B4J1U3 117 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 IGHV1-69-2A0A0G2JMI3 117 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 A0A1W2PRD5 423 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF729A6NN14 1252 aaPredicted RBP3.88□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF878C9JN71 531 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 E5RGE8 158 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 G3V2T6 193 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 SMLR1H3BR10 107 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 M0R135 149 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 BHLHE40O14503 412 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 SPINT2O43291 252 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 XRCC2O43543 280 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 MPZL1O95297 269 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 CD3GP09693 182 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 OR4E1P0C645 316 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 PSKH1P11801 424 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 SPI1P17947 270 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 PYCR1P32322 319 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 MPV17P39210 176 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 SRP9P49458 86 aaKnown RBP3.88□□□□□ -1.79
ZNF540-204ENST00000586792 GNG10P50151 68 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 TMEM33P57088 247 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 MRPS11P82912 194 aaKnown RBP3.88□□□□□ -1.79
ZNF540-204ENST00000586792 ZNF846Q147U1 533 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 CDK10Q15131 360 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 MRPL23Q16540 153 aaKnown RBP3.88□□□□□ -1.79
ZNF540-204ENST00000586792 OTPQ5XKR4 325 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 STUMQ69YW2 141 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 ASCL4Q6XD76 172 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 TMPRSS11AQ6ZMR5 421 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 SHFQ7M4L6 423 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 TMEM17Q86X19 198 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 PRSS35Q8N3Z0 413 aa3.88□□□□□ -1.79
ZNF540-204ENST00000586792 FTMTQ8N4E7 242 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms