RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 MIOXQ9UGB7 285 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 JPT1Q9UK76 154 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 FLVCR2Q9UPI3 526 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 CHD8Q9HCK8 2581 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 PKD1L2Q7Z442 2459 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 PLCE1Q9P212 2302 aa5.18□□□□□ -1.58
LIG3-206ENST00000586058 BOD1L1Q8NFC6 3051 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 BSNQ9UPA5 3926 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 CACNA1BQ00975 2339 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 TRBV6-7A0A0A0MS04 114 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 TRBV23-1A0A0A0MS06 115 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 CEACAM18A8MTB9 384 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 C19orf84I3L1E1 186 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 J3QKU1 62 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 GOSR2O14653 212 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 PPIHO43447 177 aaKnown RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 ZNF737O75373 536 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 C1QL1O75973 258 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 ATG12O94817 140 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 ZNF205O95201 554 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 DUS4LO95620 317 aaKnown RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 FSTL3O95633 263 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 HBZP02008 142 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 HPXP02790 462 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 SCTP09683 121 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 RCC1P18754 421 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 C4BPBP20851 252 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 AADACP22760 399 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 NFYAP23511 347 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 LOXP28300 417 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 GPR6P46095 362 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 RAB7AP51149 207 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 EFNA4P52798 201 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 PIGPP57054 158 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 CD83Q01151 205 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 MEF2CQ06413 473 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 FGL1Q08830 312 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 DHRS2Q13268 280 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 IGSF11Q5DX21 431 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 DHRS11Q6UWP2 260 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 GSG1LQ6UXU4 331 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 C17orf107Q6ZR85 190 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 SLC25A42Q86VD7 318 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 LHFPL1Q86WI0 220 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 GAPTQ8N292 157 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 ZCCHC24Q8N2G6 241 aaKnown RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 FAM216BQ8N7L0 139 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 OR2AK2Q8NG84 335 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 OR10V1Q8NGI7 309 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 RNASE11Q8TAA1 199 aaKnown RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 ARL11Q969Q4 196 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 NEIL1Q96FI4 390 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 AKR1E2Q96JD6 320 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 ZNF714Q96N38 554 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 GAFA1Q96PS6 74 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 CCL13Q99616 98 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 SEC22CQ9BRL7 303 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 SUCNR1Q9BXA5 334 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 METTL8Q9H825 291 aaKnown RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 OR2S2Q9NQN1 319 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 SLC2A9Q9NRM0 540 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 RDH8Q9NYR8 311 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 TAS2R3Q9NYW6 316 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 GPR132Q9UNW8 380 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 VSIG4Q9Y279 399 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 UBE2J1Q9Y385 318 aaPredicted RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 OR2W1Q9Y3N9 320 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 LINC00312Q9Y6C7 94 aa5.17□□□□□ -1.58
LIG3-206ENST00000586058 SPENQ96T58 3664 aaKnown RBP5.17□□□□□ -1.58
LIG3-206ENST00000586058 SPTA1P02549 2419 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 IGKV1D-8A0A087WSZ0 117 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 A0A0B4J293 547 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 C9orf170A2RU37 121 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 C5orf51A6NDU8 294 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 OR5H14A6NHG9 310 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 FAM25EA8MYX2 175 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 C12orf77C9JDV5 145 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 HSD17B6O14756 317 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 PHF1O43189 567 aaPredicted RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 SNAPC5O75971 98 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 SFT2D2O95562 160 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 DANCRP0C864 163 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 IL3RAP26951 378 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 CDKN1AP38936 164 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 CEACAM6P40199 344 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 GPR12P47775 334 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 GLIPR1P48060 266 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 EIF2B2P49770 351 aaKnown RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 PDLIM4P50479 330 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 GNB2P62879 340 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 RPL31P62899 125 aaKnown RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 HTD2P86397 168 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 CYCSP99999 105 aaKnown RBP5.16□□□□□ -1.58
LIG3-206ENST00000586058 DHODHQ02127 395 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 PPP1R1AQ13522 171 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 SMCO1Q147U7 214 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 SLC9A3R2Q15599 337 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 MST1LQ2TV78 715 aa5.16□□□□□ -1.58
LIG3-206ENST00000586058 TMEM155Q4W5P6 130 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms