RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 PSORS1C2Q9UIG4 136 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 MTCH2Q9Y6C9 303 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 ARHGAP32A7KAX9 2087 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 CR1P17927 2039 aa1.23□□□□□ -2.21
SMCHD1-207ENST00000581711 MUC21A0A0G2JKD1 596 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 MUC21A0A140T8X8 626 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 SPAM1P38567 509 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 UBE2KP61086 200 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 FAM183BPQ6ZVS7 135 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 OR9I1Q8NGQ6 314 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 ERMNQ8TAM6 284 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 DCANP1Q8TF63 244 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 C16orf95Q9H693 158 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 HAUS4Q9H6D7 363 aa1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 RBMX2Q9Y388 322 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-207ENST00000581711 MYO15BQ96JP2 1530 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 PXDNLA1KZ92 1463 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 F8VP50 259 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 UBDO15205 165 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 EPPINO95925 133 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 OR4A8P0C604 315 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 ZNF117Q03924 483 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 EBLN2Q6P2I7 272 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 ZNRF2Q8NHG8 242 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 FAAP24Q9BTP7 215 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 SLC19A3Q9BZV2 496 aa1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 NXT1Q9UKK6 140 aaKnown RBP1.21□□□□□ -2.22
SMCHD1-207ENST00000581711 DNMT1P26358 1616 aaKnown RBP1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 A0A1B0GW15 77 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 RNASEK-C17orf49H0YIS7 233 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 PLPP3O14495 311 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 POLR3GO15318 223 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 RPA3P35244 121 aaPredicted RBP1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 MAGEA3P43357 314 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 RWDD2BP57060 319 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 PDGFRLQ15198 375 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 FAM162BQ5T6X4 162 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 LGALS9CQ6DKI2 356 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 GLT1D1Q96MS3 346 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 CATSPER2Q96P56 530 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
SMCHD1-207ENST00000581711 MYO5BQ9ULV0 1848 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 PSMD11O00231 422 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 RGS12O14924 1447 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 CDK14O94921 469 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 VSNL1P62760 191 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 CD164Q04900 197 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 CDRT4Q8N9R6 151 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 OR11L1Q8NGX0 322 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 OR51E2Q9H255 320 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 CHTOPQ9Y3Y2 248 aaKnown RBP1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 USH1CQ9Y6N9 552 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 TNIKQ9UKE5 1360 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 ADAMTSL1Q8N6G6 1762 aa1.19□□□□□ -2.22
SMCHD1-207ENST00000581711 PTPRJQ12913 1337 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 B4DEV8 164 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 DENRO43583 198 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 NQO1P15559 274 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 PSMA1P25786 263 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 PPP1CCP36873 323 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 CARD18P57730 90 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 TPRXLQ17RH7 258 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 SSX6Q7RTT6 188 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 TRIML2Q8N7C3 387 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 YIPF7Q8N8F6 280 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 OR5D18Q8NGL1 313 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 GPR22Q99680 433 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 EBNA1BP2Q99848 306 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 C11orf49Q9H6J7 331 aa1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 NYNRINQ9P2P1 1898 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 HELZ2Q9BYK8 2649 aaKnown RBP1.18□□□□□ -2.22
SMCHD1-207ENST00000581711 USP42Q9H9J4 1324 aaKnown RBP1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 IGKV2-29A2NJV5 120 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 RAB19A4D1S5 217 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 ALOX5APP20292 161 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 CCNOP22674 350 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 LPAR6P43657 344 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 GABARAPL2P60520 117 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 VAMP3Q15836 100 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 AHSA2Q719I0 299 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 FAM45AQ8TCE6 357 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 GTF2H4Q92759 462 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 NAP1L5Q96NT1 182 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 UPK3BQ9BT76 320 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 SMDT1Q9H4I9 107 aa1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 METTL17Q9H7H0 456 aaPredicted RBP1.17□□□□□ -2.22
SMCHD1-207ENST00000581711 SIGLEC16A6NMB1 481 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 C9J4A7 227 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 H0YC42 278 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 LY6HO94772 140 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 CD36P16671 472 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 AKR1C4P17516 323 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 TSPAN5P62079 268 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 SKP2Q13309 424 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 C18orf21Q32NC0 220 aaPredicted RBP1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 Q6ZRN7 208 aaPredicted RBP1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 CCDC121Q6ZUS5 278 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 DOLPP1Q86YN1 238 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 OR11H1Q8NG94 326 aa1.16□□□□□ -2.22
SMCHD1-207ENST00000581711 C16orf78Q8WTQ4 265 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms