RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SGCZQ96LD1 299 aa14.91□□□□□ -0.02
SCARF1-205ENST00000571272 REPIN1Q9BWE0 567 aaKnown RBP14.91□□□□□ -0.02
SCARF1-205ENST00000571272 TRAV39A0A0B4J263 110 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A10PA6NDY2 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A18PA6NE21 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A16PA6NEW6 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A20PA6NIJ5 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A8PA6NJQ4 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A7PA6NKC0 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A22PA8MWA6 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A12PA8MX19 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A5PA8MXJ8 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A23PA8MXZ1 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A15PP0C7V4 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A13PP0C7W8 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A14PP0C7W9 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FAM90A24PP0C7X0 464 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 FABP4P15090 132 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 SSX7Q7RTT5 188 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 MKXQ8IYA7 352 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 ZDHHC23Q8IYP9 409 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 SSX3Q99909 188 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 PRRG4Q9BZD6 226 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 ZNF552Q9H707 407 aaPredicted RBP14.9□□□□□ -0.02
SCARF1-205ENST00000571272 DEPPQ9NTK1 212 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 TCFL5Q9UL49 500 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 LRRC3CA6NJW4 275 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 NGFP01138 241 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 GDF1P27539 372 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 PLA2G5P39877 138 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 TLE1Q04724 770 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 ARL16Q0P5N6 197 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 SCGB1C1Q8TD33 95 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 CACNG5Q9UF02 275 aa14.9□□□□□ -0.02
SCARF1-205ENST00000571272 OTX2P32243 289 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 DEFA6Q01524 100 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 ZNF726P1Q15940 193 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 IGFBP7Q16270 282 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 ZNF880Q6PDB4 577 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 ZNF600Q6ZNG1 722 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 COLCA1Q6ZS62 124 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 MYPOPQ86VE0 399 aaPredicted RBP14.89□□□□□ -0.03
SCARF1-205ENST00000571272 PRR18Q8N4B5 295 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 UBALD1Q8TB05 177 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 MRPL30Q8TCC3 161 aaKnown RBP14.89□□□□□ -0.03
SCARF1-205ENST00000571272 PRDM13Q9H4Q3 707 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 NOSIPQ9Y314 301 aaKnown RBP14.89□□□□□ -0.03
SCARF1-205ENST00000571272 MRPL33O75394 65 aaKnown RBP14.89□□□□□ -0.03
SCARF1-205ENST00000571272 CNOT4O95628 575 aaKnown RBP14.89□□□□□ -0.03
SCARF1-205ENST00000571272 BCL2P10415 239 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 GPX4P36969 197 aaPredicted RBP14.89□□□□□ -0.03
SCARF1-205ENST00000571272 FOLR3P41439 243 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 ESPL1Q14674 2120 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 OR8G1Q15617 311 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 CEACAM21Q3KPI0 293 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 KIAA2026Q5HYC2 2103 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 DPPA3Q6W0C5 159 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 H1FOOQ8IZA3 346 aaPredicted RBP14.89□□□□□ -0.03
SCARF1-205ENST00000571272 C1orf87Q8N0U7 546 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 OR10J5Q8NHC4 309 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 S100PBPQ96BU1 408 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 LRFN1Q9P244 771 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 DNAJC13O75165 2243 aa14.89□□□□□ -0.03
SCARF1-205ENST00000571272 PINLYPA6NC86 204 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 ARGFXA6NJG6 315 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 KIAA1324LA8MWY0 1029 aaPredicted RBP14.88□□□□□ -0.03
SCARF1-205ENST00000571272 CTXN2P0C2S0 81 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 PSMF1Q92530 271 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 OR51B6Q9H340 312 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 OR2W1Q9Y3N9 320 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 ARHGAP21Q5T5U3 1957 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 AHCTF1Q8WYP5 2266 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 ZNF503-AS2A6NEH8 195 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 PGA5P0DJD9 388 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 ZNF16P17020 682 aaPredicted RBP14.88□□□□□ -0.03
SCARF1-205ENST00000571272 Q0VFX4 171 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 CLDN23Q96B33 292 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 OR1A1Q9P1Q5 309 aa14.88□□□□□ -0.03
SCARF1-205ENST00000571272 OR5H1A6NKK0 313 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 CLDN34H7C241 214 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 S100GP29377 79 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 GAMTQ14353 236 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 SRSF7Q16629 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
SCARF1-205ENST00000571272 ZNF324BQ6AW86 544 aaPredicted RBP14.87□□□□□ -0.03
SCARF1-205ENST00000571272 OR1K1Q8NGR3 316 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 IL22RA2Q969J5 263 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 OPA3Q9H6K4 179 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 CISD1Q9NZ45 108 aaKnown RBP14.87□□□□□ -0.03
SCARF1-205ENST00000571272 TRAV1-1A0A0B4J248 108 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 A0A1B0GU03 582 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 CEBPZOSA8MTT3 80 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 CYTIPO60759 359 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 ELLP55199 621 aaPredicted RBP14.87□□□□□ -0.03
SCARF1-205ENST00000571272 SNX22Q96L94 193 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 RAB40CQ96S21 281 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 UBE2ZQ9H832 354 aaPredicted RBP14.87□□□□□ -0.03
SCARF1-205ENST00000571272 PRDM6Q9NQX0 595 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 GFOD1Q9NXC2 390 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 PSENENQ9NZ42 101 aa14.87□□□□□ -0.03
SCARF1-205ENST00000571272 PPP1R3CQ9UQK1 317 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms