RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 LIMS4P0CW20 117 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 CRABP1P29762 137 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 PAFAH1B3Q15102 231 aaKnown RBP2.22□□□□□ -2.05
LINC00557-201ENST00000563184 TMEM249Q2WGJ8 235 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 ZNF567Q8N184 647 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 ZNRF2Q8NHG8 242 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 CD200R1Q8TD46 325 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 DMAC2Q9NW81 257 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 COL18A1P39060 1754 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 ATG2BQ96BY7 2078 aa2.22□□□□□ -2.05
LINC00557-201ENST00000563184 FAM25EA8MYX2 175 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 ATF1P18846 271 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 CSRP1P21291 193 aaKnown RBP2.21□□□□□ -2.06
LINC00557-201ENST00000563184 SYT1P21579 422 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 EBLN2Q6P2I7 272 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 VN1R4Q7Z5H5 301 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 ZFAND2AQ8N6M9 145 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 OR5D18Q8NGL1 313 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 TREM1Q9NP99 234 aa2.21□□□□□ -2.06
LINC00557-201ENST00000563184 ATAD5Q96QE3 1844 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 LOC102725191A0A1B0GVB3 256 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 IGSF23A1L1A6 192 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 EFCAB9A8MZ26 197 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 CTSEP14091 401 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 GZMHP20718 246 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 TSPAN31Q12999 210 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 PDGFRLQ15198 375 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 SPIN4Q56A73 249 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 ZNF322Q6U7Q0 402 aaPredicted RBP2.2□□□□□ -2.06
LINC00557-201ENST00000563184 MTERF4Q7Z6M4 381 aaKnown RBP2.2□□□□□ -2.06
LINC00557-201ENST00000563184 YIPF7Q8N8F6 280 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 ANGPTL6Q8NI99 470 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 RNASEH2CQ8TDP1 164 aaKnown RBP2.2□□□□□ -2.06
LINC00557-201ENST00000563184 GALMQ96C23 342 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 TMEM56Q96MV1 263 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 ACBD6Q9BR61 282 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 TUBA4BQ9H853 241 aa2.2□□□□□ -2.06
LINC00557-201ENST00000563184 ITGB4P16144 1822 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 BAHCC1Q9P281 2608 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 TP53I11O14683 189 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 CDK14O94921 469 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 GABRA3P34903 492 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 ACTR1BP42025 376 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 DEFA6Q01524 100 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 BSPH1Q075Z2 132 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 USF2Q15853 346 aaPredicted RBP2.19□□□□□ -2.06
LINC00557-201ENST00000563184 HENMT1Q5T8I9 393 aaKnown RBP2.19□□□□□ -2.06
LINC00557-201ENST00000563184 SELENOHQ8IZQ5 122 aaKnown RBP2.19□□□□□ -2.06
LINC00557-201ENST00000563184 C17orf78Q8N4C9 275 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 C2orf73Q8N5S3 287 aaPredicted RBP2.19□□□□□ -2.06
LINC00557-201ENST00000563184 OR5C1Q8NGR4 320 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 BCL2L14Q9BZR8 327 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 AICDAQ9GZX7 198 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 C11orf49Q9H6J7 331 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 FBXL3Q9UKT7 428 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 WASHC3Q9Y3C0 194 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 VWDEQ8N2E2 1590 aa2.19□□□□□ -2.06
LINC00557-201ENST00000563184 F5H5T6 163 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 DENRO43583 198 aaKnown RBP2.18□□□□□ -2.06
LINC00557-201ENST00000563184 MPZL2O60487 215 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 PSMD7P51665 324 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 KRTAP12-1P59990 96 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 FAM3AP98173 230 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 XRCC4Q13426 336 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 SYCP1Q15431 976 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 RBM48Q5RL73 367 aaKnown RBP2.18□□□□□ -2.06
LINC00557-201ENST00000563184 Q8NDZ9 215 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 OR4P4Q8NGL7 312 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 GTF2H4Q92759 462 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 OR52A5Q9H2C5 316 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 CHMP5Q9NZZ3 219 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 CCL26Q9Y258 94 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 MPDZO75970 2070 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 DSCAML1Q8TD84 2053 aa2.18□□□□□ -2.06
LINC00557-201ENST00000563184 SORL1Q92673 2214 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 A8MWP6 167 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 K7EQS6 105 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 UGT2B11O75310 529 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 RCVRNP35243 200 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 SPAM1P38567 509 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 FAM229BQ4G0N7 80 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 CENPWQ5EE01 88 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 XKRXQ6PP77 449 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 SDIM1Q6ZPB5 146 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 DYNC2LI1Q8TCX1 351 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 SLC19A3Q9BZV2 496 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 CHST5Q9GZS9 411 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 LRRC19Q9H756 370 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 MS4A12Q9NXJ0 267 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 TAS2R9Q9NYW1 312 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 COMMD9Q9P000 198 aa2.17□□□□□ -2.06
LINC00557-201ENST00000563184 B4DEV8 164 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 TOR1AO14656 332 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 PHYHO14832 338 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 CRTAPO75718 401 aaPredicted RBP2.16□□□□□ -2.06
LINC00557-201ENST00000563184 CRYGDP07320 174 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 GADD45AP24522 165 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 PSMA1P25786 263 aaKnown RBP2.16□□□□□ -2.06
LINC00557-201ENST00000563184 GABARAPL2P60520 117 aa2.16□□□□□ -2.06
LINC00557-201ENST00000563184 ZBTB8OSQ8IWT0 167 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms