RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DNTTIP1Q9H147 329 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 ZNF665Q9H7R5 613 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 NAA60Q9H7X0 242 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 RAB18Q9NP72 206 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 PIPOXQ9P0Z9 390 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 OR2W1Q9Y3N9 320 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 DOPEY2Q9Y3R5 2298 aa11.54□□□□□ -0.56
TPM1-215ENST00000558868 CHD3Q12873 2000 aaKnown RBP11.53□□□□□ -0.56
TPM1-215ENST00000558868 PIGBOS1A0A0B4J2F0 54 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 DBX1A6NMT0 343 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 GPR31O00270 319 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 PLAUP00749 431 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 LOXP28300 417 aaPredicted RBP11.53□□□□□ -0.56
TPM1-215ENST00000558868 IL2RGP31785 369 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 PPOXP50336 477 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 SUPT4H1P63272 117 aaKnown RBP11.53□□□□□ -0.56
TPM1-215ENST00000558868 CYCSP99999 105 aaKnown RBP11.53□□□□□ -0.56
TPM1-215ENST00000558868 SLC9A3R2Q15599 337 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 SWI5Q1ZZU3 235 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 MST1LQ2TV78 715 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 GSG1LQ6UXU4 331 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 CMTM1Q8IZ96 169 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 RTN4IP1Q8WWV3 396 aaPredicted RBP11.53□□□□□ -0.56
TPM1-215ENST00000558868 IL1F10Q8WWZ1 152 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 GALNT14Q96FL9 552 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 COQ2Q96H96 371 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 PDCD10Q9BUL8 212 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 SLC2A9Q9NRM0 540 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
TPM1-215ENST00000558868 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 SMLR1H3BR10 107 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 TMEM178BH3BS89 294 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 SIAH2O43255 324 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 SPINT2O43291 252 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 B3GALNT1O75752 331 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 SIX6O95475 246 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 RPS2P15880 293 aaKnown RBP11.52□□□□□ -0.57
TPM1-215ENST00000558868 C4BPBP20851 252 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 LUMP51884 338 aaPredicted RBP11.52□□□□□ -0.57
TPM1-215ENST00000558868 H2BFSP57053 126 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 SRPXP78539 464 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 C2orf68Q2NKX9 166 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 FAM216AQ8WUB2 273 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 SECTM1Q8WVN6 248 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 NINJ1Q92982 152 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 TMEM106BQ9NUM4 274 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 OR6C3Q9NZP0 311 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 COMMD9Q9P000 198 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 PLCE1Q9P212 2302 aa11.52□□□□□ -0.57
TPM1-215ENST00000558868 TRAV39A0A0B4J263 110 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 ODAMA1E959 279 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 C5orf51A6NDU8 294 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 C12orf77C9JDV5 145 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 MPPED1O15442 326 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 ZNF205O95201 554 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 IFNA21P01568 189 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 HBZP02008 142 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 HEXAP06865 529 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 GNRHRP30968 328 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 GLIPR1P48060 266 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 P2RX3P56373 397 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 HOXA4Q00056 320 aaPredicted RBP11.51□□□□□ -0.57
TPM1-215ENST00000558868 EDDM3AQ14507 147 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 CR1LQ2VPA4 569 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 PHLDA2Q53GA4 152 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 LY6G6FQ5SQ64 297 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 ZNF788Q6ZQV5 615 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 PRR18Q8N4B5 295 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 OR10V1Q8NGI7 309 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 MRGPRDQ8TDS7 321 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 AKR1E2Q96JD6 320 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 TOLLIPQ9H0E2 274 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 METTL8Q9H825 291 aaKnown RBP11.51□□□□□ -0.57
TPM1-215ENST00000558868 HCFC1P51610 2035 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 FBN2P35556 2912 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 COL6A6A6NMZ7 2263 aa11.51□□□□□ -0.57
TPM1-215ENST00000558868 IGHV1-69-2A0A0G2JMI3 117 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 FAM25EA8MYX2 175 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 B8ZZF3 427 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 SIGLEC5O15389 551 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 NDUFA2O43678 99 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 GOSR1O95249 250 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 CD8AP01732 235 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 TFF1P04155 84 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 CEACAM6P40199 344 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 HTD2P86397 168 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 HFEQ30201 348 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 ANKRD55Q3KP44 614 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 DCAF12L2Q5VW00 463 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 LGI3Q8N145 548 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 ZCCHC24Q8N2G6 241 aaKnown RBP11.5□□□□□ -0.57
TPM1-215ENST00000558868 LRTM2Q8N967 370 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
TPM1-215ENST00000558868 DEFB108BQ8NET1 73 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 CCL17Q92583 94 aa11.5□□□□□ -0.57
TPM1-215ENST00000558868 ARL11Q969Q4 196 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms