RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 CITO14578 2027 aa-0.01□□□□□ -2.41
FOXN3-216ENST00000557496 DOCK3Q8IZD9 2030 aa-0.01□□□□□ -2.41
FOXN3-216ENST00000557496 ANAPC1Q9H1A4 1944 aa-0.01□□□□□ -2.41
FOXN3-216ENST00000557496 PTPRKQ15262 1439 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 KIF27Q86VH2 1401 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PTPRJQ12913 1337 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NRCAMQ92823 1304 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SCN10AQ9Y5Y9 1956 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ALPK3Q96L96 1907 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IGLV3-9A0A075B6K5 115 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TRGV2A0A075B6R0 118 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TMSB15BA0A087X1C1 80 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IGHV3-73A0A0B4J1V6 119 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 A0A1W2PRF3 423 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 A0A1W2PRM7 423 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DHRS12A0PJE2 317 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PGPA6NDG6 321 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ARRDC5A6NEK1 342 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NCF1BA6NI72 391 aaPredicted RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ARGFXA6NJG6 315 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RFPL4AA6NLU0 287 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GOLGA8JA6NMD2 632 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CCDC169A6NNP5 214 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 NCF1CA8MVU1 366 aaPredicted RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 A8MWP6 167 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RFPL4AL1F8VTS6 287 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF593O00488 134 aaPredicted RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RFXANKO14593 260 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TP53I11O14683 189 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PLA2G10O15496 165 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FGF16O43320 207 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 HSBP1O75506 76 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 WBP4O75554 376 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 LY6HO94772 140 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PRH1P02810 166 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GYPCP04921 128 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PTMAP06454 111 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GPX1P07203 203 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GUSBP08236 651 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GOLGA8HP0CJ92 632 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 STAG3L3P0CL85 134 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF728P0DKX0 622 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IGHV3-30-3P0DP02 117 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SPNP16150 400 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CCNOP22674 350 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PRTN3P24158 256 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IL12BP29460 328 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 CRABP1P29762 137 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GABRA3P34903 492 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SPAM1P38567 509 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GPR4P46093 362 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SERPINB10P48595 397 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RPL14P50914 215 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DAPP51397 102 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MP68P56378 58 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RWDD2BP57060 319 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TSPEAR-AS2P59090 65 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RAB2AP61019 212 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 RHOAP61586 193 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 YWHAEP62258 255 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 HOXC5Q00444 222 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PRDX1Q06830 199 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SPAG1Q07617 926 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 BAXQ07812 192 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 BNIP2Q12982 314 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SKP2Q13309 424 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IL18Q14116 193 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 LGALS9BQ3B8N2 356 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MRPL51Q4U2R6 128 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TMEM155Q4W5P6 130 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SPIN4Q56A73 249 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MESTQ5EB52 335 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C6orf183Q5T699 404 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 IDNKQ5T6J7 187 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FAHD1Q6P587 224 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DGAT2L6Q6ZPD8 337 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 VN1R4Q7Z5H5 301 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MTERF4Q7Z6M4 381 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 LRRC28Q86X40 367 aaPredicted RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DOLPP1Q86YN1 238 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 GID4Q8IVV7 300 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 MICU2Q8IYU8 434 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TCAIMQ8N3R3 496 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 SPICQ8N5J4 248 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 COMMD1Q8N668 190 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TRIML2Q8N7C3 387 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ZNF321PQ8N8H1 164 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C9orf163Q8N9P6 203 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 TMEM75Q8N9X5 138 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FER1L6-AS1Q8NA97 138 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FAM184AQ8NB25 1140 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 DRAXINQ8NBI3 349 aaPredicted RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OR11H1Q8NG94 326 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 OR4X2Q8NGF9 303 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ANGPTL6Q8NI99 470 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ERMNQ8TAM6 284 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 C16orf78Q8WTQ4 265 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 PDCD6IPQ8WUM4 868 aaKnown RBP-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 ASB17Q8WXJ9 295 aa-0.02□□□□□ -2.41
FOXN3-216ENST00000557496 FGF13Q92913 245 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms