RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 CD28P10747 220 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 GZMHP20718 246 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 MYF6P23409 242 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 MADCAM1Q13477 382 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 INSL4Q14641 139 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 IRF3Q14653 427 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 SPHARQ15513 63 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 MED22Q15528 200 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 ACSM3Q53FZ2 586 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 RAB12Q6IQ22 244 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 UNQ9370/PRO34162Q6UXP9 181 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 TMEM104Q8NE00 496 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 CCDC107Q8WV48 283 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 TMED9Q9BVK6 235 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 ANKRD60Q9BZ19 345 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 SELENOIQ9C0D9 397 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 VCX3BQ9H321 246 aa12.28□□□□□ -0.44
BRF1-220ENST00000552127 SDCBPO00560 298 aaPredicted RBP12.27□□□□□ -0.45
BRF1-220ENST00000552127 ORC5O43913 435 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 MT-ND4P03905 459 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 RAB7AP51149 207 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 GP2P55259 537 aaKnown RBP12.27□□□□□ -0.45
BRF1-220ENST00000552127 GPR50Q13585 617 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 RBM48Q5RL73 367 aaKnown RBP12.27□□□□□ -0.45
BRF1-220ENST00000552127 FAM27D1Q5T7N8 215 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 OR52M1Q8NGK5 317 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 OR10X1Q8NGY0 326 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 OR56B4Q8NH76 319 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 PHYHIPQ92561 330 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 Q96M66 194 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 CST11Q9H112 138 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 ETAA1Q9NY74 926 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 GHRLQ9UBU3 117 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 TPRKBQ9Y3C4 175 aa12.27□□□□□ -0.45
BRF1-220ENST00000552127 A0A1W2PPE3 182 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 ADARB2-AS1A8MUL3 147 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 H0YHG0 523 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 M0QZK8 103 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 SNRNP70P08621 437 aaKnown RBP12.26□□□□□ -0.45
BRF1-220ENST00000552127 NHLRC4P0CG21 123 aaPredicted RBP12.26□□□□□ -0.45
BRF1-220ENST00000552127 FAM106CPP0CH98 169 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 DIAPH2-AS1Q14236 149 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 LRRTM1Q86UE6 522 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 NDUFA11Q86Y39 141 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 OR8H3Q8N146 312 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 GAPTQ8N292 157 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 DRAM1Q8N682 238 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 UFD1Q92890 307 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 FAM46BQ96A09 425 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 DUSP21Q9H596 190 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 GFOD1Q9NXC2 390 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 MOB4Q9Y3A3 225 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 PEX16Q9Y5Y5 336 aa12.26□□□□□ -0.45
BRF1-220ENST00000552127 FAM90A9PA6NNJ1 464 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 C12orf77C9JDV5 145 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 HSD17B6O14756 317 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 RGS10O43665 173 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 CA11O75493 328 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 SC5DO75845 299 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 AMY1AP04745 511 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 AMY2AP04746 511 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 GLAP06280 429 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 UBBP0CG47 229 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 FUT3P21217 361 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 VHLP40337 213 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 ZNF816Q0VGE8 651 aaPredicted RBP12.25□□□□□ -0.45
BRF1-220ENST00000552127 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 HSD17B12Q53GQ0 312 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 C6orf183Q5T699 404 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 SYT6Q5T7P8 510 aaPredicted RBP12.25□□□□□ -0.45
BRF1-220ENST00000552127 LIPKQ5VXJ0 399 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 GLT8D1Q68CQ7 371 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 IZUMO2Q6UXV1 221 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 CEACAM19Q7Z692 300 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 LINC00311Q8N616 119 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 C8orf31Q8N9H6 132 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 OR4K15Q8NH41 348 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 CITED2Q99967 270 aaPredicted RBP12.25□□□□□ -0.45
BRF1-220ENST00000552127 RAB9BQ9NP90 201 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 TRAPPC2LQ9UL33 140 aa12.25□□□□□ -0.45
BRF1-220ENST00000552127 IGHV3-43A0A0B4J1X8 118 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 SH2D7A6NKC9 451 aaPredicted RBP12.24□□□□□ -0.45
BRF1-220ENST00000552127 SPINT2O43291 252 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 PDCD6O75340 191 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 LPLP06858 475 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 UCHL1P09936 223 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 IGHV3-43DP0DP04 118 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 HSPA13P48723 471 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 Q3ZCU0 254 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 C1orf100Q5SVJ3 147 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 SIGIRRQ6IA17 410 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 TRAT1Q6PIZ9 186 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 MUC7Q8TAX7 377 aa12.24□□□□□ -0.45
BRF1-220ENST00000552127 UBE2QL1A1L167 161 aa12.23□□□□□ -0.45
BRF1-220ENST00000552127 CCRL2O00421 344 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms