RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 CEACAM6P40199 344 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 RAB5BP61020 215 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 MPV17LQ2QL34 196 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 TMEM211Q6ICI0 200 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 BTNL8Q6UX41 500 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 FOXL2NBQ6ZUU3 175 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 NANPQ8TBE9 248 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 PLK3Q9H4B4 646 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 Q9N2K0 584 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 CD46P15529 392 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 FGF12P61328 243 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 CACFD1Q9UGQ2 172 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 TUBD1Q9UJT1 453 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 CACNA1BQ00975 2339 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 TRGV5A0A0B4J1U4 118 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 B4E171 279 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 KLRC4-KLRK1H3BQV0 150 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 H7C1Q1 480 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 RRP8O43159 456 aaKnown RBP11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 DEFA4P12838 97 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 HOXC12P31275 282 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 TSPAN7P41732 249 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 SOX8P57073 446 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 RAB11AP62491 216 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 GNG3P63215 75 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 ZNF343Q6P1L6 599 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 UBAC2Q8NBM4 344 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 PARP11Q9NR21 331 aa11.66□□□□□ -0.54
PRPF40B-209ENST00000548825 CLDN1O95832 211 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 SP1P08047 785 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 TUBG1P23258 451 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 SNCAP37840 140 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 RPL23AP62750 156 aaKnown RBP11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 TESK1Q15569 626 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 NCMAPQ5T1S8 102 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 STX12Q86Y82 276 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 BOD1Q96IK1 185 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 SPIN2AQ99865 258 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 SPIN2BQ9BPZ2 258 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 PBDC1Q9BVG4 233 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 BIN3Q9NQY0 253 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 DLL3Q9NYJ7 618 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 ADAMTS20P59510 1910 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 SPAARA0A1B0GVQ0 90 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 PGLYRP1O75594 196 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 AESQ08117 197 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 KIR2DS1Q14954 304 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 PRAMEF6Q5VXH4 476 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 TMEM42Q69YG0 159 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 C18orf12Q96KH6 178 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 POMT1Q9Y6A1 747 aa11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 COL5A1P20908 1838 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 TLN1Q9Y490 2541 aaKnown RBP11.65□□□□□ -0.54
PRPF40B-209ENST00000548825 A0A1W2PPE3 182 aa11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 PQLC2LA1A4F0 135 aa11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 IFNA5P01569 189 aa11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 IL2RGP31785 369 aa11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 TAGLN2P37802 199 aaKnown RBP11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 UBE2KP61086 200 aa11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF766Q5HY98 468 aa11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 MUC6Q6W4X9 2439 aa11.65□□□□□ -0.55
PRPF40B-209ENST00000548825 TRAV24A0A0B4J272 114 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 KIAA1324LA8MWY0 1029 aaPredicted RBP11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 DANCRP0C864 163 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF266Q14584 549 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF573Q86YE8 665 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 SLC25A40Q8TBP6 338 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 MRGPRDQ8TDS7 321 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 POM121L2Q96KW2 1035 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 PRDM14Q9GZV8 571 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 KPTNQ9Y664 436 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 DNPH1O43598 174 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 OR3A1P47881 315 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 GPR146Q96CH1 333 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 PLEKHF2Q9H8W4 249 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 ATRXP46100 2492 aa11.64□□□□□ -0.55
PRPF40B-209ENST00000548825 ZNF98A6NK75 572 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 S100A9P06702 114 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 IL13RA2Q14627 380 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 LINC00518Q8N0U6 118 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 CYB561D1Q8N8Q1 229 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 DCTN5Q9BTE1 182 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 CARHSP1Q9Y2V2 147 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 OR2C1O95371 312 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 OR2H2O95918 312 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 IL18BPO95998 194 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 ACP1P24666 158 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 ARR3P36575 388 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 SULT1A1P50225 295 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 FABP9Q0Z7S8 132 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 TBC1D28Q2M2D7 210 aa11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 EIF2S3LQ2VIR3 472 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-209ENST00000548825 Q6ZRM9 215 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms