RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 TMEM30BQ3MIR4 351 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 SYT6Q5T7P8 510 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-209ENST00000546974 TGIF2LXQ8IUE1 241 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 FOXRED2Q8IWF2 684 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 GAPTQ8N292 157 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 COMMD1Q8N668 190 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 Q8N6K4 173 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 LINC00482Q8N8I6 264 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 OR2T10Q8NGZ9 312 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 UBALD1Q8TB05 177 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 RTN4IP1Q8WWV3 396 aaPredicted RBP11.36□□□□□ -0.59
COL2A1-209ENST00000546974 PLCXD1Q9NUJ7 323 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 ETAA1Q9NY74 926 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 TRAPPC2LQ9UL33 140 aa11.36□□□□□ -0.59
COL2A1-209ENST00000546974 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 PNMA8CA0A1B0GUJ8 204 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 FAM90A7PA6NKC0 464 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 FAM90A23PA8MXZ1 464 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 C12orf77C9JDV5 145 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 SPINT2O43291 252 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 CA11O75493 328 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 MPIG6BO95866 241 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 MAS1P04201 325 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 GLAP06280 429 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 CD1BP29016 333 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 CAPGP40121 348 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 THBS3P49746 956 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 ZNF137PP52743 207 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 WNT4P56705 351 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 AWAT2Q6E213 333 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 RAB12Q6IQ22 244 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 LAIR2Q6ISS4 152 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 FAM53AQ6NSI3 398 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-209ENST00000546974 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 ETV3LQ6ZN32 361 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 SLC25A48Q6ZT89 311 aaKnown RBP11.35□□□□□ -0.59
COL2A1-209ENST00000546974 OR2W3Q7Z3T1 314 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 LYPD6Q86Y78 171 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 MRPL41Q8IXM3 137 aaKnown RBP11.35□□□□□ -0.59
COL2A1-209ENST00000546974 C8orf59Q8N0T1 100 aaPredicted RBP11.35□□□□□ -0.59
COL2A1-209ENST00000546974 STPG2Q8N412 459 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 TMEM104Q8NE00 496 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 THRSPQ92748 146 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 DERL3Q96Q80 235 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 GPR61Q9BZJ8 451 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 ABCG5Q9H222 651 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 PSORS1C1Q9UIG5 152 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 LINC00527Q9UJ94 153 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 PEX16Q9Y5Y5 336 aa11.35□□□□□ -0.59
COL2A1-209ENST00000546974 COL7A1Q02388 2944 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 NCBP2LA6PVI3 153 aaKnown RBP11.34□□□□□ -0.59
COL2A1-209ENST00000546974 AP4M1O00189 453 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 MYL12BO14950 172 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 TXNL1O43396 289 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 SC5DO75845 299 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 MOSP00540 346 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 CELP19835 753 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 RCN1Q15293 331 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 NKAIN3Q8N8D7 197 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 Q8N9W7 124 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 ZNF439Q8NDP4 499 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 OR4K15Q8NH41 348 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 FBLIM1Q8WUP2 373 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 UQCC2Q9BRT2 126 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 SELENOIQ9C0D9 397 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 BANF2Q9H503 90 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 LIN7CQ9NUP9 197 aaKnown RBP11.34□□□□□ -0.59
COL2A1-209ENST00000546974 GNG12Q9UBI6 72 aa11.34□□□□□ -0.59
COL2A1-209ENST00000546974 LINC01548A6NM66 108 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 K7EIL1 84 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 SLC31A2O15432 143 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 CRTAPO75718 401 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-209ENST00000546974 HBZP02008 142 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 GNAO1P09471 354 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 MGMTP16455 207 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 FUT3P21217 361 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 MAPK3P27361 379 aaPredicted RBP11.33□□□□□ -0.6
COL2A1-209ENST00000546974 MYCNOSP40205 109 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 GPR12P47775 334 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 ZNF134P52741 427 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 EGFEM1PQ0D2K5 195 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 CT45A1Q5HYN5 189 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 STEAP3Q658P3 488 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 TEX38Q6PEX7 206 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 AHSA2Q719I0 299 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 NANOGP1Q8N7R0 232 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 OR8H1Q8NGG4 311 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 CT45A3Q8NHU0 189 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 Q96M66 194 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 GON7Q9BXV9 100 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 PLSCR3Q9NRY6 295 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 GHRLQ9UBU3 117 aa11.33□□□□□ -0.6
COL2A1-209ENST00000546974 NUDT19A8MXV4 375 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 CASQ2O14958 399 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-209ENST00000546974 RCC1P18754 421 aaPredicted RBP11.32□□□□□ -0.6
COL2A1-209ENST00000546974 VHLP40337 213 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 KRTAP10-11P60412 298 aa11.32□□□□□ -0.6
COL2A1-209ENST00000546974 PNLIPRP3Q17RR3 467 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms