RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TSPAN32Q96QS1 320 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 HSD17B10Q99714 261 aaKnown RBP7.68□□□□□ -1.18
VPS13D-212ENST00000543766 TVP23BQ9NYZ1 205 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 HIGD1AQ9Y241 93 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 NEURL1O76050 574 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 UBL3O95164 117 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 B3GALT4O96024 378 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 NRASP01111 189 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 SP1P08047 785 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 LIMS3P0CW19 117 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 LIMS4P0CW20 117 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 CXCL8P10145 99 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 FKBP1BP68106 108 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 RELBQ01201 579 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 IHHQ14623 411 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 MLF2Q15773 248 aaPredicted RBP7.68□□□□□ -1.18
VPS13D-212ENST00000543766 TNFAIP8L2Q6P589 184 aaPredicted RBP7.68□□□□□ -1.18
VPS13D-212ENST00000543766 AGTRAPQ6RW13 159 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 CHRDL2Q6WN34 429 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 LINC01465Q8N7H1 131 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 TMEM178AQ8NBL3 297 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 OR4B1Q8NGF8 309 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 APOBEC3DQ96AK3 386 aaPredicted RBP7.68□□□□□ -1.18
VPS13D-212ENST00000543766 B9D1Q9UPM9 204 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 RNF115Q9Y4L5 304 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 PLXNA3P51805 1871 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 A0A087WX48 190 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 IGHV1-69-2A0A0G2JMI3 117 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 LOC102725191A0A1B0GVB3 256 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 GSTZ1O43708 216 aaPredicted RBP7.68□□□□□ -1.18
VPS13D-212ENST00000543766 EIF4EP06730 217 aaKnown RBP7.68□□□□□ -1.18
VPS13D-212ENST00000543766 HTR1DP28221 377 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 GPM6AP51674 278 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 PSG6Q00889 435 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 COL10A1Q03692 680 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 POM121L1PQ3SYA9 428 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 SLC38A5Q8WUX1 472 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 PNPLA2Q96AD5 504 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 SLAMF6Q96DU3 332 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 OR2H1Q9GZK4 316 aa7.68□□□□□ -1.18
VPS13D-212ENST00000543766 FGF20Q9NP95 211 aaPredicted RBP7.68□□□□□ -1.18
VPS13D-212ENST00000543766 ALOX5APP20292 161 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 PNRC1Q12796 327 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-212ENST00000543766 MALLQ13021 153 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 HLA-DRB5Q30154 266 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 MORN2Q502X0 79 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 CD300LDQ6UXZ3 194 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 TGIF2LYQ8IUE0 185 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 KREMEN2Q8NCW0 462 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 PARLQ9H300 379 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 ACER3Q9NUN7 267 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 KCNS2Q9ULS6 477 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 TRAV8-6A0A0B4J262 113 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 PRSS46E5RG02 174 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 BCL2L11O43521 198 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 ZNF92Q03936 586 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 MPV17L2Q567V2 206 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 RAB37Q96AX2 223 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 HSPB9Q9BQS6 159 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 DPY30Q9C005 99 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 C20orf141Q9NUB4 165 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 C1RLQ9NZP8 487 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 FLRT3Q9NZU0 649 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 OSGIN2Q9Y236 505 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 NSG2Q9Y328 171 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 RPL36Q9Y3U8 105 aaKnown RBP7.67□□□□□ -1.18
VPS13D-212ENST00000543766 TNRC18O15417 2968 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-212ENST00000543766 MYO7AQ13402 2215 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 J3KT08 172 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 KNG1P01042 644 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 HLA-DQB2P05538 268 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 KLK1P06870 262 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 EN2P19622 333 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-212ENST00000543766 KIR2DL1P43626 348 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-212ENST00000543766 SLC6A9P48067 706 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 ZXDAP98168 799 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 ZXDBP98169 803 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 LAMTOR4Q0VGL1 99 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 C6orf226Q5I0X4 101 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 EEF1DP3Q658K8 133 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 VN1R2Q8NFZ6 395 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 OR10G7Q8NGN6 311 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 PPCDCQ96CD2 204 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 DNAJC30Q96LL9 226 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 MARCH5Q9NX47 278 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 EMC9Q9Y3B6 208 aa7.67□□□□□ -1.18
VPS13D-212ENST00000543766 PATJQ8NI35 1801 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 SMIM35A0A1B0GVV1 85 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 C9JQL5 133 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 FCGR3BO75015 233 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 NGFP01138 241 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 CT45A8P0DMV1 189 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 CT45A9P0DMV2 189 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 WNT3AP56704 352 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 RPL38P63173 70 aaKnown RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 HES1Q14469 280 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 CT45A2Q5DJT8 189 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 C8orf86Q6ZUL3 223 aa7.66□□□□□ -1.18
VPS13D-212ENST00000543766 SPAG8Q99932 426 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-212ENST00000543766 LSM7Q9UK45 103 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms