RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 ZNF816-ZNF321PA0A0X1KG74 233 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 KBTBD11O94819 623 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 IGKV1-13P0DP09 117 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 ADIRFQ15847 76 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 BSXQ3C1V8 233 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 ACOT6Q3I5F7 207 aaPredicted RBP15.08■□□□□ 0
RAB40C-205ENST00000539661 ZNF774Q6NX45 483 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 NAXEQ8NCW5 288 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 CCL28Q9NRJ3 127 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 TP53I11O14683 189 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 NXPH3O95157 252 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 WNT2P09544 360 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 METTL15P1P0C7V9 234 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 TMEM267Q0VDI3 215 aaPredicted RBP15.08■□□□□ 0
RAB40C-205ENST00000539661 IQCJQ1A5X6 159 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 LRRC75BQ2VPJ9 315 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 ZNF66Q6ZN08 573 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 ZNF525Q8N782 197 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 GPR146Q96CH1 333 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 RASL10BQ96S79 203 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 VSIRQ9H7M9 311 aa15.08■□□□□ 0
RAB40C-205ENST00000539661 TMEM250H0YL14 139 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 H7BYZ3 331 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 PGLYRP1O75594 196 aaPredicted RBP15.07■□□□□ 0
RAB40C-205ENST00000539661 F2RP25116 425 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 GALR1P47211 349 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 FGF8P55075 233 aaPredicted RBP15.07■□□□□ 0
RAB40C-205ENST00000539661 TRIM61Q5EBN2 209 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 ZNF611Q8N823 705 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 ZIC4Q8N9L1 334 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 MAP1LC3B2A6NCE7 125 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 SLC33A1O00400 549 aaPredicted RBP15.07■□□□□ 0
RAB40C-205ENST00000539661 ZNF737O75373 536 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 SCTP09683 121 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 APLNRP35414 380 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 HBG1P69891 147 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 HBG2P69892 147 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 TNFRSF9Q07011 255 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 WDR74Q6RFH5 385 aaPredicted RBP15.07■□□□□ 0
RAB40C-205ENST00000539661 SSX7Q7RTT5 188 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 ANAPC16Q96DE5 110 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 MAP1LC3BQ9GZQ8 125 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 RBKSQ9H477 322 aa15.07■□□□□ 0
RAB40C-205ENST00000539661 CHCHD2Q9Y6H1 151 aaPredicted RBP15.07■□□□□ 0
RAB40C-205ENST00000539661 IGHV3-15A0A0B4J1V0 119 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 IGHV1OR15-9A0A0B4J2B8 117 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 HRASP01112 189 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 CD55P08174 381 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 NUBP1P53384 320 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 MEF2BQ02080 365 aaPredicted RBP15.06■□□□□ 0
RAB40C-205ENST00000539661 ZNF92Q03936 586 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 HERPUD1Q15011 391 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 ZNF837Q96EG3 531 aaPredicted RBP15.06■□□□□ 0
RAB40C-205ENST00000539661 H3BP45 60 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 EREGO14944 169 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 HOXA6P31267 233 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 ACTL10Q5JWF8 245 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 CALHM1Q8IU99 346 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 C17orf78Q8N4C9 275 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 PIGCQ92535 297 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 UCN2Q96RP3 112 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 ATP23Q9Y6H3 246 aa15.06■□□□□ 0
RAB40C-205ENST00000539661 TYMSP04818 313 aa15.05■□□□□ 0
RAB40C-205ENST00000539661 JMJD7P0C870 316 aa15.05■□□□□ 0
RAB40C-205ENST00000539661 GZMHP20718 246 aa15.05■□□□□ 0
RAB40C-205ENST00000539661 RPL23P62829 140 aaKnown RBP15.05■□□□□ 0
RAB40C-205ENST00000539661 P2RY6Q15077 328 aa15.05■□□□□ 0
RAB40C-205ENST00000539661 LSM10Q969L4 123 aaKnown RBP15.05■□□□□ 0
RAB40C-205ENST00000539661 SF3B5Q9BWJ5 86 aaKnown RBP15.05■□□□□ 0
RAB40C-205ENST00000539661 DEFB126Q9BYW3 111 aa15.05■□□□□ 0
RAB40C-205ENST00000539661 TMEM38BQ9NVV0 291 aa15.05■□□□□ 0
RAB40C-205ENST00000539661 A0A0G2JRQ6 117 aa15.05■□□□□ -0
RAB40C-205ENST00000539661 SYNGR2O43760 224 aa15.05■□□□□ -0
RAB40C-205ENST00000539661 GLB1P16278 677 aa15.05■□□□□ -0
RAB40C-205ENST00000539661 SAXO1Q8IYX7 474 aa15.05■□□□□ -0
RAB40C-205ENST00000539661 CISD2Q8N5K1 135 aaKnown RBP15.05■□□□□ -0
RAB40C-205ENST00000539661 GPHA2Q96T91 129 aa15.05■□□□□ -0
RAB40C-205ENST00000539661 TIMM9Q9Y5J7 89 aa15.05■□□□□ -0
RAB40C-205ENST00000539661 CNTRLQ7Z7A1 2325 aa15.05■□□□□ -0
RAB40C-205ENST00000539661 RTTNQ86VV8 2226 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 LRP5LA4QPB2 252 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 B4E171 279 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 SERPINE2P07093 398 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 ZNF32P17041 273 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 RAB4AP20338 218 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 SRP14P37108 136 aaKnown RBP15.04■□□□□ -0
RAB40C-205ENST00000539661 TSPAN7P41732 249 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 IDH3GP51553 393 aaPredicted RBP15.04■□□□□ -0
RAB40C-205ENST00000539661 PRSS12P56730 875 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 PAX5Q02548 391 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 CPT1CQ8TCG5 803 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 WDR61Q9GZS3 305 aaKnown RBP15.04■□□□□ -0
RAB40C-205ENST00000539661 PSENENQ9NZ42 101 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 C19orf25Q9UFG5 118 aaPredicted RBP15.04■□□□□ -0
RAB40C-205ENST00000539661 M0R143 59 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 GGCTO75223 188 aaKnown RBP15.04■□□□□ -0
RAB40C-205ENST00000539661 TUBG1P23258 451 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 ERVFC1-1P60608 527 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 ERVS71-1P61550 626 aa15.04■□□□□ -0
RAB40C-205ENST00000539661 PRAMEF20Q5VT98 475 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms