RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TRGV8A0A0C4DH27 118 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 MED19A0JLT2 244 aaPredicted RBP14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 JTBO76095 146 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 GAPDHP04406 335 aaKnown RBP14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 FBP1P09467 338 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 NQO2P16083 231 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 FCGR2CP31995 323 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 LY6DQ14210 128 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 DAZAP2Q15038 168 aaPredicted RBP14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 RSRP1Q9BUV0 290 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 CADP27708 2225 aa14.5□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR5B21A6NL26 309 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 SERPINE3A8MV23 424 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 C3orf80F5H4A9 247 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 H0YL77 283 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 WRBO00258 174 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 DEDDO75618 318 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 MT-ND4LP03901 98 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 RD3LP0DJH9 198 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR10AD1Q8NGE0 317 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 TCTEX1D2Q8WW35 142 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 ZNF488Q96MN9 340 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 ZNF701Q9NV72 531 aaPredicted RBP14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 IGHV3-64DA0A0J9YX35 117 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 A6NLC8 198 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR8U8P0C7N1 319 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 RBM11P57052 281 aaKnown RBP14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 TMEM33P57088 247 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 KRBOX4Q5JUW0 171 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 WDR86Q86TI4 376 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 ZNF573Q86YE8 665 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 LYPD6BQ8NI32 183 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR51I2Q9H344 312 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 JKAMPQ9P055 326 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 IL36RNQ9UBH0 155 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 KPTNQ9Y664 436 aa14.49□□□□□ -0.09
PCDHB17P-201ENST00000539533 IGKV1D-8A0A087WSZ0 117 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 SELEP16581 610 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 MKXQ8IYA7 352 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 SAXO1Q8IYX7 474 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 Q8NFD4 153 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 SECTM1Q8WVN6 248 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 RND1Q92730 232 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 ISOC2Q96AB3 205 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 HDHD3Q9BSH5 251 aaPredicted RBP14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 SMIM3Q9BZL3 60 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 ADGRG4Q8IZF6 3080 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 RHBDL1O75783 438 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 IGHV2-5P01817 119 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 CHATP28329 748 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 ZNF718Q3SXZ3 478 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 SGPP2Q8IWX5 399 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 VKORC1Q9BQB6 163 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 ZNF2Q9BSG1 426 aaPredicted RBP14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 RTL8AQ9BWD3 113 aa14.48□□□□□ -0.09
PCDHB17P-201ENST00000539533 POLEQ07864 2286 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 A0A1W2PPH5 198 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 C16orf97H3BN30 126 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 TRAPPC2LH3BP13 241 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 SNRNP70P08621 437 aaKnown RBP14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 ECI1P42126 302 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 MSMPQ1L6U9 139 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR2B11Q5JQS5 317 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR8G5Q8NG78 346 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 DYRK2Q92630 601 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 FAM122AQ96E09 287 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 ELOVL5Q9NYP7 299 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 HSF4Q9ULV5 492 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 LSM5Q9Y4Y9 91 aaKnown RBP14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 SHANK1Q9Y566 2161 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 MLNRO43193 412 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR7C1O76099 320 aaPredicted RBP14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 ARL6IP1Q15041 203 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 HMGN3Q15651 99 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 GGNBP1Q5YKI7 109 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 MRPL24Q96A35 216 aaKnown RBP14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 PARP12Q9H0J9 701 aaKnown RBP14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 AK3Q9UIJ7 227 aa14.47□□□□□ -0.09
PCDHB17P-201ENST00000539533 TPRP12270 2363 aaKnown RBP14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 hCG_1809904A0A1W2PP81 198 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 A0A1W2PR64 198 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 A0A1W2PRV1 198 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 CRYM-AS1A6NIL9 109 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 TIMM8AO60220 97 aaPredicted RBP14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 CA11O75493 328 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 IFNA21P01568 189 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 CRYAAP02489 173 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 CTSDP07339 412 aaPredicted RBP14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 TUBG1P23258 451 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 GCH1P30793 250 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 FGF12P61328 243 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 OR8G1Q15617 311 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 AWAT1Q58HT5 328 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 C9orf152Q5JTZ5 239 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 UBAC2Q8NBM4 344 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 MSL2Q9HCI7 577 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 TUBG2Q9NRH3 451 aa14.46□□□□□ -0.09
PCDHB17P-201ENST00000539533 TSPAN15O95858 294 aa14.46□□□□□ -0.1
PCDHB17P-201ENST00000539533 KITLGP21583 273 aa14.46□□□□□ -0.1
PCDHB17P-201ENST00000539533 DUSP1P28562 367 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms