RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ATXN7L3Q14CW9 347 aaPredicted RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 C11orf91Q3C1V1 193 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 TMEM128Q5BJH2 165 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 SLC35E4Q6ICL7 350 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4L9Q6RFH8 374 aaPredicted RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 SLC36A1Q7Z2H8 476 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 LYG2Q86SG7 212 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 FAM185AQ8N0U4 392 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 C12orf45Q8N5I9 185 aaPredicted RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 ZNF565Q8N9K5 539 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 OR13C8Q8NGS7 320 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 COQ8AQ8NI60 647 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 MRPL30Q8TCC3 161 aaKnown RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 MARCH1Q8TCQ1 289 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 MAFIPQ8WZ33 124 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 ZNF486Q96H40 463 aaPredicted RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 CCL19Q99731 98 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 SEC22CQ9BRL7 303 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 ZNF2Q9BSG1 426 aaPredicted RBP7.1□□□□□ -1.27
VAPB-206ENST00000520497 FAM234AQ9H0X4 552 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 ZNF665Q9H7R5 613 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 MGAT4CQ9UBM8 478 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 KAAG1Q9UBP8 84 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 DUX4Q9UBX2 424 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 SLC23A1Q9UHI7 598 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 TRAPPC2LQ9UL33 140 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 PCDHB10Q9UN67 800 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 AKAP9Q99996 3911 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 CR1P17927 2039 aa7.1□□□□□ -1.27
VAPB-206ENST00000520497 SDCBPO00560 298 aaPredicted RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 NDUFA2O43678 99 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 NDUFS7O75251 213 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 FCN3O75636 299 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 DUS4LO95620 317 aaKnown RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 GYPAP02724 150 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 CTSDP07339 412 aaPredicted RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 GIPP09681 153 aaPredicted RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 SULT1A3P0DMM9 295 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 SULT1A4P0DMN0 295 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 SELLP14151 372 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 AKR1C4P17516 323 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 CD34P28906 385 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 GABRA2P47869 451 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 NPY4RP50391 375 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 UCP3P55916 312 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 RAP2BP61225 183 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 IL13RA1P78552 427 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 FCN2Q15485 313 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 LHFPL1Q86WI0 220 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 SGPP2Q8IWX5 399 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 SLC38A6Q8IZM9 456 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 FAM216BQ8N7L0 139 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 ASCC1Q8N9N2 400 aaKnown RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 UXS1Q8NBZ7 420 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 ZNRF1Q8ND25 227 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 DEFB108BQ8NET1 73 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 TMEM185AQ8NFB2 350 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 OR5D13Q8NGL4 314 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 OR10J5Q8NHC4 309 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 KIRREL1Q96J84 757 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 CCL13Q99616 98 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 TMEM246Q9BRR3 403 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 NCOR1P1Q9H4R4 102 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 RANBP3Q9H6Z4 567 aaPredicted RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 CHODLQ9H9P2 273 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 MBNL3Q9NUK0 354 aaKnown RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 ITGB1BP2Q9UKP3 347 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 GPR132Q9UNW8 380 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 VSIG4Q9Y279 399 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 KCNIP3Q9Y2W7 256 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 OTOGQ6ZRI0 2925 aa7.09□□□□□ -1.27
VAPB-206ENST00000520497 PRRC2AP48634 2157 aaKnown RBP7.09□□□□□ -1.27
VAPB-206ENST00000520497 CREBBPQ92793 2442 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 A0A0B4J2A0 478 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 TEX13DA0A0J9YY54 714 aaPredicted RBP7.08□□□□□ -1.28
VAPB-206ENST00000520497 MGST3O14880 152 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 HSPA12AO43301 675 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 IGHV4-39P01824 125 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 C1QBP02746 253 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 VSIG10L2P0DP72 767 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 PAX1P15863 534 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 RCC1P18754 421 aaPredicted RBP7.08□□□□□ -1.28
VAPB-206ENST00000520497 C4BPBP20851 252 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 ERP29P30040 261 aaKnown RBP7.08□□□□□ -1.28
VAPB-206ENST00000520497 FCGR2CP31995 323 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 P2RX3P56373 397 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 SRPXP78539 464 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 AESQ08117 197 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 DHRS2Q13268 280 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 TMEM155Q4W5P6 130 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 KRBOX4Q5JUW0 171 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 DHRS11Q6UWP2 260 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 MUC20Q8N307 709 aaPredicted RBP7.08□□□□□ -1.28
VAPB-206ENST00000520497 NINJ1Q92982 152 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 TOMM40LQ969M1 308 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 MOB3AQ96BX8 217 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 LURAP1Q96LR2 239 aa7.08□□□□□ -1.28
VAPB-206ENST00000520497 HYLS1Q96M11 299 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms