RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 RBMXP38159 391 aaKnown RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 OR3A4PP47883 348 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 ATP1B3P54709 279 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 LINC01547P58512 204 aaPredicted RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 B3GALT5-AS1P59052 145 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 PPIAP62937 165 aaKnown RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 OC90Q02509 493 aaPredicted RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 ARFRP1Q13795 201 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 UBE2V2Q15819 145 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 SGCAQ16586 387 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 RSPO1Q2MKA7 263 aaPredicted RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 CHRFAM7AQ494W8 412 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 C9orf152Q5JTZ5 239 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 C10orf91Q5T1B1 145 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 AADACL3Q5VUY0 350 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 ELP2Q6IA86 826 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 OR52W1Q6IF63 320 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 DHRS11Q6UWP2 260 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 CLEC18BQ6UXF7 455 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 Q75L30 129 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 COMMD2Q86X83 199 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 BAP18Q8IXM2 172 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 TMEM156Q8N614 296 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 GVQW1Q8N7I0 195 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 LRTM2Q8N967 370 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 ZIC4Q8N9L1 334 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 ZBTB44Q8NCP5 570 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 TMEM104Q8NE00 496 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 Q8NFD4 153 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 OR10K1Q8NGX5 313 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 OR1F12Q8NHA8 337 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 MARCH1Q8TCQ1 289 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 MR1Q95460 341 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 TMEM230Q96A57 120 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 CMBLQ96DG6 245 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 DNAJA3Q96EY1 480 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 GALNT14Q96FL9 552 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 ARHGAP5-AS1Q96IT6 56 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 FAM71F1Q96KD3 344 aaPredicted RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 CXorf58Q96LI9 332 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 LINC00052Q96N35 136 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 MS4A10Q96PG2 267 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 RTBDNQ9BSG5 229 aaPredicted RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 NICN1Q9BSH3 213 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 RNF126Q9BV68 326 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 ZNF471Q9BX82 626 aaPredicted RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 SUCNR1Q9BXA5 334 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 ULBP2Q9BZM5 246 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 LINC00470Q9BZP3 86 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 C5orf66Q9H5L9 145 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 HPF1Q9NWY4 346 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 PLEK2Q9NYT0 353 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 MBD2Q9UBB5 411 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 C14orf166Q9Y224 244 aaKnown RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 KCNIP3Q9Y2W7 256 aa3.15□□□□□ -1.91
CAST-242ENST00000515063 MKI67P46013 3256 aaKnown RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 LAMA2P24043 3122 aaKnown RBP3.15□□□□□ -1.91
CAST-242ENST00000515063 IGKV3D-15A0A087WSY6 115 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 hCG_38984A0A1B0GV85 526 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 DUXBA0A1W2PPF3 345 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 TMEM218A2RU14 115 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 OR5H15A6NDH6 313 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CRYM-AS1A6NIL9 109 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 ZNF716A6NP11 495 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 EEF1E1-BLOC1S5C9J1V9 151 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RPL36A-HNRNPH2H7BZ11 118 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CCSO14618 274 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 ABCD4O14678 606 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CYTIPO60759 359 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RAMP1O60894 148 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RAD51DO75771 328 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 IFNA21P01568 189 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SERPINA5P05154 406 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SERPINA7P05543 415 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CSN2P05814 226 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 GLAP06280 429 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 WNT2P09544 360 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CCL3P10147 92 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 AKR1C4P17516 323 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RBP2P50120 134 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SULT1A2P50226 295 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 LUMP51884 338 aaPredicted RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 SNU13P55769 128 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 CLDN15P56746 228 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CARD18P57730 90 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SUPT4H1P63272 117 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 SRPXP78539 464 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
CAST-242ENST00000515063 FAM3AP98173 230 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 ZNF273Q14593 569 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SMCO1Q147U7 214 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 SLC22A6Q4U2R8 563 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 PHYHD1Q5SRE7 291 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 GPR157Q5UAW9 335 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 RAET1LQ5VY80 246 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 OTPQ5XKR4 325 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 CARD17Q5XLA6 110 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 TMEM211Q6ICI0 200 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 PET117Q6UWS5 81 aa3.14□□□□□ -1.91
CAST-242ENST00000515063 C17orf107Q6ZR85 190 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms