RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 SATL1Q86VE3 508 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 LYPD6Q86Y78 171 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 MINDY2Q8NBR6 621 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 PXT1Q8NFP0 134 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 TNFAIP8L1Q8WVP5 186 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 CHCHD3Q9NX63 227 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 KIAA1456Q9P272 454 aa15.62■□□□□ 0.09
SQSTM1-215ENST00000514093 OR4C45A6NMZ5 311 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 SOX15O60248 233 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 IGHV3-11P01762 117 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 LGALS1P09382 135 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 T-ENOLP0DO92 83 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 POLR2IP36954 125 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 LSAMPQ13449 338 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 RSU1Q15404 277 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 ECSCRQ19T08 205 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 CT45A1Q5HYN5 189 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 OR10V1Q8NGI7 309 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 CT45A3Q8NHU0 189 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 EME1Q96AY2 570 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 GPER1Q99527 375 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 RSRP1Q9BUV0 290 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 ANKRD60Q9BZ19 345 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 FAM192AQ9GZU8 254 aa15.61■□□□□ 0.09
SQSTM1-215ENST00000514093 A0A1W2PN81 502 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 GABRPO00591 440 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 HSPA12AO43301 675 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 TXNL1O43396 289 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 OR7C1O76099 320 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 IFNA6P05013 189 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 HOXB6P17509 224 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 CHRNA7P36544 502 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 CCR9P51686 369 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 ACTBP60709 375 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 SERPINA12Q8IW75 414 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 ZNF439Q8NDP4 499 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 OR5D14Q8NGL3 314 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 RETNQ9HD89 108 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 ST3GAL6Q9Y274 331 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 FBXO7Q9Y3I1 522 aa15.6■□□□□ 0.09
SQSTM1-215ENST00000514093 DAPL1A0PJW8 107 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 J3QLW9 94 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 SLC16A6O15403 523 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 CDRT1O95170 752 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 HLA-DRB1P01911 266 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 ZNF19P17023 458 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 ZNF137PP52743 207 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 PELI1Q96FA3 418 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 MRPS28Q9Y2Q9 187 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 A3GALT2U3KPV4 340 aa15.59■□□□□ 0.09
SQSTM1-215ENST00000514093 GEMIN2O14893 280 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 ORC5O43913 435 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 IGLV1-51P01701 117 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 CALB2P22676 271 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 NDPQ00604 133 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 ALKBH1Q13686 389 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 FLOT2Q14254 428 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 ATAD3CQ5T2N8 411 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 KDM4DQ6B0I6 523 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 LIN54Q6MZP7 749 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 KCTD20Q7Z5Y7 419 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 ANKRD13BQ86YJ7 626 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 PRR18Q8N4B5 295 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 OR51A2Q8NGJ7 313 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 NEK7Q8TDX7 302 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 ZNF251Q9BRH9 671 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 GNG12Q9UBI6 72 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 FRAS1Q86XX4 4008 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 HERC2O95714 4834 aa15.58■□□□□ 0.08
SQSTM1-215ENST00000514093 TCRBV3S1A0A5B6 114 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 C12orf77C9JDV5 145 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 G3V2T6 193 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 MT-ND4P03905 459 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 HSPB1P04792 205 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 GYS2P54840 703 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 PARP16Q8N5Y8 322 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 C4orf36Q96KX1 117 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 FAM110AQ9BQ89 295 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 TMED9Q9BVK6 235 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 ELOVL1Q9BW60 279 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 STUB1Q9UNE7 303 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 ING4Q9UNL4 249 aa15.57■□□□□ 0.08
SQSTM1-215ENST00000514093 AIPO00170 330 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 NBR2O15453 112 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 GNGT1P63211 74 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 TMED1Q13445 227 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 C5orf64Q2M2E5 130 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 Q3ZCU0 254 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 C19orf54Q5BKX5 351 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 ASCL4Q6XD76 172 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 OR8J1Q8NGP2 316 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 OR1L1Q8NH94 360 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 RFKQ969G6 155 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 FLYWCH2Q96CP2 140 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 MS4A10Q96PG2 267 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 CIB1Q99828 191 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 IFT22Q9H7X7 185 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 TNCP24821 2201 aa15.56■□□□□ 0.08
SQSTM1-215ENST00000514093 J3QRE1 110 aa15.55■□□□□ 0.08
SQSTM1-215ENST00000514093 MAGEB3O15480 346 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms