RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ZNF329Q86UD4 541 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 FOXRED2Q8IWF2 684 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 OR8H3Q8N146 312 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 NANOGP1Q8N7R0 232 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 C5orf56Q8N8D9 126 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 ZNF439Q8NDP4 499 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 SETD9Q8NE22 299 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 BPIFB6Q8NFQ5 453 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 OR10A7Q8NGE5 316 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 OR4K15Q8NH41 348 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 OR1L1Q8NH94 360 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 ARL11Q969Q4 196 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 ST6GALNAC6Q969X2 333 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 PLCXD1Q9NUJ7 323 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 GFOD1Q9NXC2 390 aa8.62□□□□□ -1.03
RNF4-212ENST00000509258 CNOT2Q9NZN8 540 aaKnown RBP8.62□□□□□ -1.03
RNF4-212ENST00000509258 LSM2Q9Y333 95 aaKnown RBP8.62□□□□□ -1.03
RNF4-212ENST00000509258 IGHV1-3A0A0C4DH29 117 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 EFCAB10A6NFE3 127 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 NUDT19A8MXV4 375 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 IGKV1D-33P01593 117 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 IGKV1-33P01594 117 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 CSTBP04080 98 aaKnown RBP8.61□□□□□ -1.03
RNF4-212ENST00000509258 TMEM11P17152 192 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 ZNF134P52741 427 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 WNT4P56705 351 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 MPV17LQ2QL34 196 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 OR10K2Q6IF99 312 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 SLC16A12Q6ZSM3 486 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 C8orf59Q8N0T1 100 aaPredicted RBP8.61□□□□□ -1.03
RNF4-212ENST00000509258 GAPTQ8N292 157 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 JAGN1Q8N5M9 183 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 Q8N6K4 173 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 LINC00482Q8N8I6 264 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 OR10V1Q8NGI7 309 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 OR10X1Q8NGY0 326 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 TFAP2CQ92754 450 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 GON7Q9BXV9 100 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 RAB9BQ9NP90 201 aa8.61□□□□□ -1.03
RNF4-212ENST00000509258 SERPINE3A8MV23 424 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 AIPO00170 330 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 SDCBPO00560 298 aaPredicted RBP8.6□□□□□ -1.03
RNF4-212ENST00000509258 HSD17B6O14756 317 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 CDK1P06493 297 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 GTF2F2P13984 249 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 MGMTP16455 207 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 RCC1P18754 421 aaPredicted RBP8.6□□□□□ -1.03
RNF4-212ENST00000509258 IL3RAP26951 378 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
RNF4-212ENST00000509258 MYCNOSP40205 109 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 ZNF816Q0VGE8 651 aaPredicted RBP8.6□□□□□ -1.03
RNF4-212ENST00000509258 GNMTQ14749 295 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 CT45A1Q5HYN5 189 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 SYT6Q5T7P8 510 aaPredicted RBP8.6□□□□□ -1.03
RNF4-212ENST00000509258 AWAT2Q6E213 333 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 RAB12Q6IQ22 244 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 SLC35E3Q7Z769 313 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 LINC00596Q86U02 117 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 LRRTM1Q86UE6 522 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 LINC00311Q8N616 119 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 CT45A3Q8NHU0 189 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 NEK7Q8TDX7 302 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 FAM46BQ96A09 425 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 EAF1Q96JC9 268 aaPredicted RBP8.6□□□□□ -1.03
RNF4-212ENST00000509258 Q96M66 194 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 WWC2-AS2Q96NR7 200 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 S100A13Q99584 98 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 GFI1Q99684 422 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 SELENOIQ9C0D9 397 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 C8orf4Q9NR00 106 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 PLSCR3Q9NRY6 295 aa8.6□□□□□ -1.03
RNF4-212ENST00000509258 A0A0A6YYD4 124 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 UBE2QL1A1L167 161 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 MYL12BO14950 172 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 HBZP02008 142 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 CD1AP06126 327 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 THBS3P49746 956 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 AQP4P55087 323 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 RPL23AP62750 156 aaKnown RBP8.59□□□□□ -1.03
RNF4-212ENST00000509258 EBI3Q14213 229 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 IRF3Q14653 427 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 LCNL1Q6ZST4 164 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 MOB3BQ86TA1 216 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 MRPL41Q8IXM3 137 aaKnown RBP8.59□□□□□ -1.03
RNF4-212ENST00000509258 STX19Q8N4C7 294 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 MRPL30Q8TCC3 161 aaKnown RBP8.59□□□□□ -1.03
RNF4-212ENST00000509258 CHCHD3Q9NX63 227 aaKnown RBP8.59□□□□□ -1.03
RNF4-212ENST00000509258 PEX16Q9Y5Y5 336 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 RYR3Q15413 4870 aa8.59□□□□□ -1.03
RNF4-212ENST00000509258 AP4M1O00189 453 aa8.58□□□□□ -1.04
RNF4-212ENST00000509258 CCRL2O00421 344 aa8.58□□□□□ -1.04
RNF4-212ENST00000509258 RRP9O43818 475 aaKnown RBP8.58□□□□□ -1.04
RNF4-212ENST00000509258 ORC5O43913 435 aa8.58□□□□□ -1.04
RNF4-212ENST00000509258 RAMP3O60896 148 aa8.58□□□□□ -1.04
RNF4-212ENST00000509258 CRTAPO75718 401 aaPredicted RBP8.58□□□□□ -1.04
RNF4-212ENST00000509258 SC5DO75845 299 aa8.58□□□□□ -1.04
RNF4-212ENST00000509258 GAPDHP04406 335 aaKnown RBP8.58□□□□□ -1.04
RNF4-212ENST00000509258 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
RNF4-212ENST00000509258 GZMHP20718 246 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms