RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 PLK3Q9H4B4 646 aa9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 LYRM2Q9NU23 88 aaPredicted RBP9.4□□□□□ -0.9
SH3RF1-203ENST00000508685 OR7C1O76099 320 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 CELA3BP08861 270 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF14P17017 642 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 RAB5AP20339 215 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 IGHV1-2P23083 117 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 SNRPEP62304 92 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 NHLH2Q02577 135 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 PLP2Q04941 152 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 FOXF2Q12947 444 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 GUSBP1Q15486 140 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 OR8G1Q15617 311 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 SOHLH1Q5JUK2 328 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 IGFL3Q6UXB1 125 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 CALHM1Q8IU99 346 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 MKXQ8IYA7 352 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 CMTM1Q8IZ96 169 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF611Q8N823 705 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 HSD17B11Q8NBQ5 300 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 APOBEC3DQ96AK3 386 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 SARAFQ96BY9 339 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 TP53RKQ96S44 253 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 USB1Q9BQ65 265 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 OPA3Q9H6K4 179 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 Q9N2K0 584 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 ZDHHC8Q9ULC8 765 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 PKD1L2Q7Z442 2459 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF732B4DXR9 585 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 EIF3GO75821 320 aaKnown RBP eCLIP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 IFNA17P01571 189 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 HBE1P02100 147 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 VDAC1P21796 283 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 GNRHRP30968 328 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 KIR2DL2P43627 348 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 FGF12P61328 243 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 ACSF3Q4G176 576 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 MRPL21Q7Z2W9 205 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 SELENOHQ8IZQ5 122 aaKnown RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 SUMF2Q8NBJ7 301 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 OR2G3Q8NGZ4 309 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 TCTEX1D2Q8WW35 142 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 EXTL1Q92935 676 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 BSCL2Q96G97 398 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 NBEAQ8NFP9 2946 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 ADGRG4Q8IZF6 3080 aa9.39□□□□□ -0.91
SH3RF1-203ENST00000508685 RELNP78509 3460 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 LRP5LA4QPB2 252 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 NKX2-6A6NCS4 301 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 LILRA1O75019 489 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 NAPSAO96009 420 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 SLC25A6P12236 298 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 UCP1P25874 307 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 APLNRP35414 380 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 EIF2S3P41091 472 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 SULT1A1P50225 295 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 ID3Q02535 119 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 PRDX4Q13162 271 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 AKIRIN2Q53H80 203 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 SPATA46Q5T0L3 261 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 MEX3BQ6ZN04 569 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 TMEM182Q6ZP80 229 aaPredicted RBP9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 Q6ZT83 130 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 SLC25A26Q70HW3 274 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 TBC1D26Q86UD7 250 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 OR11L1Q8NGX0 322 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 CD300LFQ8TDQ1 290 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 RBMXL1Q96E39 390 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 FGF23Q9GZV9 251 aaPredicted RBP9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 GLRX2Q9NS18 164 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 KIAA1456Q9P272 454 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 FAM221AA4D161 298 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 RBFOX3A6NFN3 312 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 DFFBO76075 338 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 WNT2P09544 360 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 TLE4Q04727 773 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 CEACAM21Q3KPI0 293 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 SPIN3Q5JUX0 258 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 Q6ZS92 163 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 OR5D13Q8NGL4 314 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 NANOS1Q8WY41 292 aaKnown RBP9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 DYRK2Q92630 601 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 ZNF251Q9BRH9 671 aa9.38□□□□□ -0.91
SH3RF1-203ENST00000508685 CACNA1BQ00975 2339 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 A0A087WWC5 75 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 TRBV6-6A0A0A6YYG2 114 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 CXorf65A6NEN9 183 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 FAM24AA6NFZ4 105 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 H0Y980 276 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 TUSC2O75896 110 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 ATP6V0CP27449 155 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 NPBWR2P48146 333 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 GPM6AP51674 278 aa9.37□□□□□ -0.91
SH3RF1-203ENST00000508685 TGFBR3Q03167 851 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms