RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 MEF2BQ02080 365 aaPredicted RBP15.19■□□□□ 0.02
NUP54-205ENST00000507257 SHHQ15465 462 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 MRPL52Q86TS9 123 aaKnown RBP15.19■□□□□ 0.02
NUP54-205ENST00000507257 ZNF837Q96EG3 531 aaPredicted RBP15.19■□□□□ 0.02
NUP54-205ENST00000507257 UCN2Q96RP3 112 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 DEFB126Q9BYW3 111 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 STRADBQ9C0K7 418 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 LAMP3Q9UQV4 416 aa15.19■□□□□ 0.02
NUP54-205ENST00000507257 A0A0G2JRQ6 117 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 H7BYZ3 331 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 ZNF32P17041 273 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 SRP14P37108 136 aaKnown RBP15.18■□□□□ 0.02
NUP54-205ENST00000507257 GALR1P47211 349 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 DSCR4P56555 118 aaPredicted RBP15.18■□□□□ 0.02
NUP54-205ENST00000507257 RPS18P62269 152 aaKnown RBP15.18■□□□□ 0.02
NUP54-205ENST00000507257 RPL23P62829 140 aaKnown RBP15.18■□□□□ 0.02
NUP54-205ENST00000507257 Q6ZS52 159 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 SSX7Q7RTT5 188 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 RLN3Q8WXF3 142 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 TMEM106CQ9BVX2 250 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 WDR61Q9GZS3 305 aaKnown RBP15.18■□□□□ 0.02
NUP54-205ENST00000507257 RBKSQ9H477 322 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 VSIRQ9H7M9 311 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
NUP54-205ENST00000507257 B4E171 279 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 SYNGR2O43760 224 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 ZNF737O75373 536 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 TSPAN7P41732 249 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 TMEM267Q0VDI3 215 aaPredicted RBP15.17■□□□□ 0.02
NUP54-205ENST00000507257 ADIRFQ15847 76 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 ZNF66Q6ZN08 573 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 CISD2Q8N5K1 135 aaKnown RBP15.17■□□□□ 0.02
NUP54-205ENST00000507257 PIGCQ92535 297 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 IER2Q9BTL4 223 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 IGHV3-15A0A0B4J1V0 119 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 IGKV1-6A0A0C4DH72 117 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 CYTIPO60759 359 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 SNRPCP09234 159 aaKnown RBP15.17■□□□□ 0.02
NUP54-205ENST00000507257 PCBD1P61457 104 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 TNFRSF9Q07011 255 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 PDCD1Q15116 288 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 PCSK4Q6UW60 755 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 CADM4Q8NFZ8 388 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 BTF3L4Q96K17 158 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 WASF3Q9UPY6 502 aa15.17■□□□□ 0.02
NUP54-205ENST00000507257 GON4LQ3T8J9 2241 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 ASXL3Q9C0F0 2248 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 CD55P08174 381 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 LIFP15018 202 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 GZMHP20718 246 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 FGF8P55075 233 aaPredicted RBP15.16■□□□□ 0.02
NUP54-205ENST00000507257 RAC1P63000 192 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 PSG4Q00888 419 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 OR2H1Q9GZK4 316 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 PRDM14Q9GZV8 571 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 DCAF16Q9NXF7 216 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 OR2W1Q9Y3N9 320 aa15.16■□□□□ 0.02
NUP54-205ENST00000507257 TNRC6BQ9UPQ9 1833 aaKnown RBP15.15■□□□□ 0.02
NUP54-205ENST00000507257 CCDC163A0A0D9SF12 145 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 GJE1A6NN92 205 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 H3BP45 60 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 ZIC3O60481 467 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 VENTXO95231 258 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 SERPINE2P07093 398 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 RAB4AP20338 218 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 MDKP21741 143 aaPredicted RBP15.15■□□□□ 0.02
NUP54-205ENST00000507257 APLNRP35414 380 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 ERVFC1-1P60608 527 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 LCN2P80188 198 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 ZNF324BQ6AW86 544 aaPredicted RBP15.15■□□□□ 0.02
NUP54-205ENST00000507257 LINC00596Q86U02 117 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 HAPLN4Q86UW8 402 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 TSTD1Q8NFU3 115 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 R3HDM4Q96D70 268 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 C1QTNF5Q9BXJ0 243 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 WNT5BQ9H1J7 359 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 PSENENQ9NZ42 101 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 OR6C3Q9NZP0 311 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 EML6Q6ZMW3 1958 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 USP34Q70CQ2 3546 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 ZNF705GA8MUZ8 300 aaPredicted RBP15.15■□□□□ 0.02
NUP54-205ENST00000507257 TNFSF11O14788 317 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 EREGO14944 169 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 PAX5Q02548 391 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 ARL16Q0P5N6 197 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 P2RY6Q15077 328 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 RIPPLY2Q5TAB7 128 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 PRAMEF20Q5VT98 475 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 RAET1LQ5VY80 246 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 FBXO46Q6PJ61 603 aaPredicted RBP15.15■□□□□ 0.02
NUP54-205ENST00000507257 LHX4Q969G2 390 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 IMMP2LQ96T52 175 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 OR51I2Q9H344 312 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 MANBALQ9NQG1 85 aa15.15■□□□□ 0.02
NUP54-205ENST00000507257 KIR2DL5BA0A0G2JN68 375 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 KIR2DL5BA0A0G2JPC4 375 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 A0A0J9YW62 118 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 FAM90A26D6RGX4 464 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 NPIPB11E5RHQ5 1161 aa15.14■□□□□ 0.01
NUP54-205ENST00000507257 NXPH3O95157 252 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms