RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PGAM2P15259 253 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 CBR1P16152 277 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 TAC1P20366 129 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 ACOT2P49753 483 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC7A9P82251 487 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 RUNX1Q01196 453 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 PNOCQ13519 176 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 OR2F1Q13607 317 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 HERPUD1Q15011 391 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 RSPO1Q2MKA7 263 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 TCTEX1D4Q5JR98 221 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 CGB2Q6NT52 195 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 CEMP1Q6PRD7 247 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF493Q6ZR52 646 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 FAM183BPQ6ZVS7 135 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 Q8N377 158 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 ARIH2OSQ8N7S6 290 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 ACBD4Q8NC06 268 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 PXT1Q8NFP0 134 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 BEST4Q8NFU0 473 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 OR2G3Q8NGZ4 309 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 OR2T4Q8NH00 348 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 CCL17Q92583 94 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 CEP19Q96LK0 163 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 FAAP24Q9BTP7 215 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 EMC6Q9BV81 110 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 MROQ9BYG7 248 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 RHOFQ9HBH0 211 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 EXOSC4Q9NPD3 245 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 FBXO6Q9NRD1 293 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 DMAC2Q9NW81 257 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 STOML2Q9UJZ1 356 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 PLXNA4Q9HCM2 1894 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 PCNX3Q9H6A9 2034 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 VWA8A3KMH1 1905 aa2.29□□□□□ -2.04
DEPDC1-204ENST00000489862 MYH11P35749 1972 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 IGLV8-61A0A075B6I0 122 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 IGHV1-69DA0A0B4J2H0 117 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 A0A0J9YXY3 114 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 ARGFXA6NJG6 315 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 I3L4J1 428 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 PSMD12O00232 456 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 HCRTO43612 131 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF207O43670 478 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 PI15O43692 258 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 CHP2O43745 196 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 SSNA1O43805 119 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 TBL1XO60907 577 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 LYPLA1O75608 230 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 SERPINB7O75635 380 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 CXCL8P10145 99 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 COX7A1P24310 79 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 RBMXP38159 391 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 CDKN2BP42772 138 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 RPS9P46781 194 aaKnown RBP2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 IFITM2Q01629 132 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 PMVKQ15126 192 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 TMED2Q15363 201 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 RSU1Q15404 277 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 CDNFQ49AH0 187 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 ZCWPW2Q504Y3 356 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 MESTQ5EB52 335 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM255AQ5JRV8 349 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 CLEC12AQ5QGZ9 265 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 METTL21CQ5VZV1 264 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM215Q68D42 235 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF343Q6P1L6 599 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 DHRS4L2Q6PKH6 230 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF645Q8N7E2 425 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 OR1N2Q8NGR9 330 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 OR2V1Q8NHB1 315 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 EEF1AKMT1Q8WVE0 214 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 GHSRQ92847 366 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 YIPF5Q969M3 257 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 NTAN1Q96AB6 310 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM159Q96B96 161 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 RNF157Q96PX1 679 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 NIPSNAP1Q9BPW8 284 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 SULT4A1Q9BR01 284 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 TMEM243Q9BU79 118 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 SUCNR1Q9BXA5 334 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC17A9Q9BYT1 436 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 SLC25A39Q9BZJ4 359 aaPredicted RBP2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 CHST5Q9GZS9 411 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 ZNF702PQ9H963 129 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 WFDC1Q9HC57 220 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 HEBP1Q9NRV9 189 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 RAB22AQ9UL26 194 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 TRAPPC4Q9Y296 219 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 HEBP2Q9Y5Z4 205 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 CACNG2Q9Y698 323 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 SCN1AP35498 2009 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 ANK1P16157 1881 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 NLRC5Q86WI3 1866 aa2.28□□□□□ -2.04
DEPDC1-204ENST00000489862 COL4A4P53420 1690 aaPredicted RBP2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 PVALEFA0A1B0GWK0 134 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 CLDN24A6NM45 220 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 TRIM49D1C9J1S8 452 aa2.28□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF878C9JN71 531 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms