RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TBL1YQ9BQ87 522 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 C20orf144Q9BQM9 153 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF649Q9BS31 505 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 ANGPTL4Q9BY76 406 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC17A9Q9BYT1 436 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 PKIBQ9C010 78 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM38AQ9H6F2 299 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM242Q9NWH2 141 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 SMPXQ9UHP9 88 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 IKZF2Q9UKS7 526 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 NPIPA1Q9UND3 350 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 FLVCR2Q9UPI3 526 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 ENPP4Q9Y6X5 453 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 KIF25-AS1Q9Y6Z4 181 aa2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 MTCL1Q9Y4B5 1905 aaKnown RBP2.8□□□□□ -1.96
ECHDC1-217ENST00000488087 BRCA1P38398 1863 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 DOCK5Q9H7D0 1870 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 NUP98P52948 1817 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ROBO1Q9Y6N7 1651 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 IGLV8-61A0A075B6I0 122 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 C20orf202A1L168 122 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TVP23AA6NH52 213 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR5H14A6NHG9 310 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 FAM183AA6NL82 134 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF705EA8MWA4 302 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 B4DEV8 164 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 BHLHE40O14503 412 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 RNF13O43567 381 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TIMM8AO60220 97 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR1I1O60431 355 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BKO60814 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 MMP23AO75900 390 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HPRT1P00492 218 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CSTAP01040 98 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TRBC1P01850 177 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 MT-ND4P03905 459 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 GAPDHP04406 335 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BJP06899 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SOD3P08294 240 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 UCHL1P09936 223 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 P0C879 139 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SRMP19623 302 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 GSTM3P21266 225 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BOP23527 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 BRS3P32247 399 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BBP33778 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CAPZBP47756 277 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TTPAP49638 278 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SULT1A1P50225 295 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SULT1A2P50226 295 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CDKN2DP55273 166 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CAV3P56539 151 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 NDUFA6P56556 154 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BDP58876 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 RPS14P62263 151 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BCP62807 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CDK5Q00535 292 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 EWSR1Q01844 656 aaKnown RBP eCLIP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 C1orf61Q13536 156 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HERPUD1Q15011 391 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 RAB11BQ15907 218 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 GUK1Q16774 197 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST2H2BEQ16778 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 LINC00303Q3SY05 128 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC25A52Q3SY17 297 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 MORN2Q502X0 79 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 AKIRIN2Q53H80 203 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CTSL3PQ5NE16 218 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 LY6G6FQ5SQ64 297 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 CARD17Q5XLA6 110 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 WSCD1Q658N2 575 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 RPL22L1Q6P5R6 122 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ZNF322Q6U7Q0 402 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TMIGD1Q6UXZ0 262 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SLC25A26Q70HW3 274 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 RPS27LQ71UM5 84 aaKnown RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SSX7Q7RTT5 188 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 COMMD6Q7Z4G1 85 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 VTCN1Q7Z7D3 282 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ACOT1Q86TX2 421 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 WDFY1Q8IWB7 410 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 TMEM183AQ8IXX5 376 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 H1FOOQ8IZA3 346 aaPredicted RBP2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 C10orf111Q8N326 155 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 FAM24BQ8N5W8 94 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 ACOT4Q8N9L9 421 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 BBS1Q8NFJ9 593 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR8G5Q8NG78 346 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR4S1Q8NGB4 309 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR51S1Q8NGJ8 323 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR1L4Q8NGR5 311 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR8U1Q8NH10 309 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 EEF1AKMT1Q8WVE0 214 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 OR1E3Q8WZA6 343 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 GHSRQ92847 366 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 SMARCD2Q92925 531 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 HIST1H2BHQ93079 126 aa2.79□□□□□ -1.96
ECHDC1-217ENST00000488087 PSMG2Q969U7 264 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms