RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	RHBDL2	Q9NX52	303 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	GFOD1	Q9NXC2	390 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ETAA1	Q9NY74	926 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	IDI2-AS1	Q9NZ38	188 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	KCNIP1	Q9NZI2	227 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	CCDC59	Q9P031	241 aa	Known RBP	4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	DPM3	Q9P2X0	92 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ONECUT1	Q9UBC0	465 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF69	Q9UC07	566 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	KIF25	Q9UIL4	384 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF580	Q9UK33	172 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	ANAPC10	Q9UM13	185 aa		4.14	□□□□□ -1.75
HDAC6-223	ENST00000480525	TMEM89	A2RUT3	159 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	FAM90A9P	A6NNJ1	464 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	LEUTX	A8MZ59	168 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	C12orf77	C9JDV5	145 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	BUB1B-PAK6	H3BSN5	160 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525		J3QR06	171 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	SULT1C2	O00338	296 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	XRCC3	O43542	346 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC22A5	O76082	557 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	FGF2	P09038	288 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	CCL3L1	P16619	93 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF182	P17025	639 aa	Predicted RBP	4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	TBP	P20226	339 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZBTB25	P24278	435 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	CDK2	P24941	298 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	PTBP1	P26599	531 aa	Known RBP eCLIP	4.13	□□□□□ -1.75	1e-16	■■■■■ 43.3
HDAC6-223	ENST00000480525	IL3RA	P26951	378 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	DUSP1	P28562	367 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	BRS3	P32247	399 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	SOX6	P35712	828 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	RPS19	P39019	145 aa	Known RBP	4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	LGALS4	P56470	323 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR10A3	P58181	314 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	HOXA4	Q00056	320 aa	Predicted RBP	4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	MADCAM1	Q13477	382 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	LRRC75B	Q2VPJ9	315 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF260	Q3ZCT1	412 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	PLAC9	Q5JTB6	97 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	UBE2NL	Q5JXB2	153 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ATAD3C	Q5T2N8	411 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	MZT2A	Q6P582	158 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	BAIAP2L2	Q6UXY1	529 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	TRAPPC6B	Q86SZ2	158 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	PRIMA1	Q86XR5	153 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	IZUMO1	Q8IYV9	350 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	CADM3	Q8N126	398 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525		Q8N2B8	174 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZDHHC22	Q8N966	263 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ZNF439	Q8NDP4	499 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR13A1	Q8NGR1	328 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	OR10K1	Q8NGX5	313 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	LHX4	Q969G2	390 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	BORCS5	Q969J3	196 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	ST6GALNAC6	Q969X2	333 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	PHF21A	Q96BD5	680 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	SLC25A38	Q96DW6	304 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	S100A16	Q96FQ6	103 aa	Known RBP	4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	AKR1E2	Q96JD6	320 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	RNF5	Q99942	180 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	SULT4A1	Q9BR01	284 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	AGMAT	Q9BSE5	352 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	PECR	Q9BY49	303 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	NXF2	Q9GZY0	626 aa	Known RBP	4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	RBM38	Q9H0Z9	239 aa	Known RBP	4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525		Q9N2K0	584 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	DIABLO	Q9NR28	239 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	PIPOX	Q9P0Z9	390 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	VPREB3	Q9UKI3	123 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	KCNK7	Q9Y2U2	307 aa		4.13	□□□□□ -1.75
HDAC6-223	ENST00000480525	TNC	P24821	2201 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	TRBV6-7	A0A0A0MS04	114 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525		A0A0A6YYD4	124 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	LOC100506127	A0A0U1RQW1	187 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	BTBD17	A6NE02	478 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	TRDC	B7Z8K6	153 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	CTDSPL	O15194	276 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	SOCS1	O15524	211 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	FGF16	O43320	207 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	LANCL1	O43813	399 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	RBBP9	O75884	186 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	TSPAN9	O75954	239 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	HBZ	P02008	142 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	FCGR3A	P08637	254 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	HKR1	P10072	659 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	NAT1	P18440	290 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	SSTR5	P35346	364 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	UBA52	P62987	128 aa	Known RBP	4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	HLA-DRB3	P79483	266 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	MRPS15	P82914	257 aa	Known RBP	4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	FOXL1	Q12952	345 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	EDDM3A	Q14507	147 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	HES5	Q5TA89	166 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	C16orf87	Q6PH81	154 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	CNIH2	Q6PI25	160 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	C6orf201	Q7Z4U5	140 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	ABHD12	Q8N2K0	398 aa		4.12	□□□□□ -1.75
HDAC6-223	ENST00000480525	FGFRL1	Q8N441	504 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms