RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 PCDHB16Q9NRJ7 776 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 SERTAD4Q9NUC0 356 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 TRAPPC2LQ9UL33 140 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 LSM2Q9Y333 95 aaKnown RBP6.63□□□□□ -1.35
ERCC8-205ENST00000477893 TPRKBQ9Y3C4 175 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 PEX16Q9Y5Y5 336 aa6.63□□□□□ -1.35
ERCC8-205ENST00000477893 TET2Q6N021 2002 aaPredicted RBP6.62□□□□□ -1.35
ERCC8-205ENST00000477893 A0A087X0M5 115 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 A0A1B0GX30 115 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 FAM90A22PA8MWA6 464 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 C12orf77C9JDV5 145 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 H3BUI4 141 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 HSD17B6O14756 317 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 SLC31A2O15432 143 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 CGB3P0DN86 165 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 CGB7P0DN87 165 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 MYF6P23409 242 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 MADCAM1Q13477 382 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 GPR176Q14439 515 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 P2RY14Q15391 338 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 HSD17B12Q53GQ0 312 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 SYT6Q5T7P8 510 aaPredicted RBP6.62□□□□□ -1.35
ERCC8-205ENST00000477893 CCDC144NLQ6NUI1 221 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 C11orf88Q6PI97 169 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 ZNF497Q6ZNH5 498 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 C5orf24Q7Z6I8 188 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 MOB3BQ86TA1 216 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 OR1L1Q8NH94 360 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 CREB3L1Q96BA8 519 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 AKR1E2Q96JD6 320 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 CITED2Q99967 270 aaPredicted RBP6.62□□□□□ -1.35
ERCC8-205ENST00000477893 VCX3BQ9H321 246 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 IFT22Q9H7X7 185 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 GNG12Q9UBI6 72 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 WNK1Q9H4A3 2382 aa6.62□□□□□ -1.35
ERCC8-205ENST00000477893 A0A1W2PPI3 338 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 NPIPB11E5RHQ5 1161 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 LY6LH3BQJ8 138 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 C15orf65H3BRN8 121 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 CCRL2O00421 344 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 OR2F2O95006 317 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 IGKV1D-33P01593 117 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 IGKV1-33P01594 117 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 MT-ND4P03905 459 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 CD1AP06126 327 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 FAM106CPP0CH98 169 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 TMEM11P17152 192 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 RCC1P18754 421 aaPredicted RBP6.61□□□□□ -1.35
ERCC8-205ENST00000477893 SLC35A2P78381 396 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 IRF3Q14653 427 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 GNMTQ14749 295 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 GLT8D1Q68CQ7 371 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 C10orf99Q6UWK7 81 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 LRRTM1Q86UE6 522 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 Q8N2B8 174 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 MS4A15Q8N5U1 240 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 SETD6Q8TBK2 473 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 CFHR4Q92496 578 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 THRSPQ92748 146 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 Q96M66 194 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 RBM14Q96PK6 669 aaKnown RBP6.61□□□□□ -1.35
ERCC8-205ENST00000477893 UQCC2Q9BRT2 126 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 NICN1Q9BSH3 213 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 ANKRD60Q9BZ19 345 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 CST11Q9H112 138 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 LIN7BQ9HAP6 207 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 PLGRKTQ9HBL7 147 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 SPACA1Q9HBV2 294 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 CHMP1AQ9HD42 196 aaPredicted RBP6.61□□□□□ -1.35
ERCC8-205ENST00000477893 RCC2Q9P258 522 aaKnown RBP6.61□□□□□ -1.35
ERCC8-205ENST00000477893 MOB4Q9Y3A3 225 aa6.61□□□□□ -1.35
ERCC8-205ENST00000477893 OOSP1A8MZH6 123 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 SPINT2O43291 252 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 PDCD6O75340 191 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 HBZP02008 142 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 SRMP19623 302 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 FUT3P21217 361 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 CALRP27797 417 aaKnown RBP6.6□□□□□ -1.35
ERCC8-205ENST00000477893 RAB7AP51149 207 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 CLDN12P56749 244 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 PAX5Q02548 391 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 C6orf183Q5T699 404 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 RNLSQ5VYX0 342 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 SIGIRRQ6IA17 410 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 UNQ9370/PRO34162Q6UXP9 181 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 C6orf201Q7Z4U5 140 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 CENPVQ7Z7K6 275 aaPredicted RBP6.6□□□□□ -1.35
ERCC8-205ENST00000477893 LYPD6Q86Y78 171 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 OR5AU1Q8NGC0 362 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 OR52L2PQ8NGH6 319 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 MRPL30Q8TCC3 161 aaKnown RBP6.6□□□□□ -1.35
ERCC8-205ENST00000477893 R3HDM4Q96D70 268 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 NEDD4LQ96PU5 975 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 SULT4A1Q9BR01 284 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 TMEM59Q9BXS4 323 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 NCOR1P1Q9H4R4 102 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 GFOD1Q9NXC2 390 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 LINC00527Q9UJ94 153 aa6.6□□□□□ -1.35
ERCC8-205ENST00000477893 AK6Q9Y3D8 172 aaKnown RBP6.6□□□□□ -1.35
ERCC8-205ENST00000477893 IGHV1-3A0A0C4DH29 117 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms