RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 VSIRQ9H7M9 311 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 MRPL40Q9NQ50 206 aaKnown RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 DAZ3Q9NR90 486 aaKnown RBP2.94□□□□□ -1.94
VPS13D-207ENST00000476169 PLSCR3Q9NRY6 295 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 OPN4Q9UHM6 478 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 BTRCQ9Y297 605 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 COL18A1P39060 1754 aa2.94□□□□□ -1.94
VPS13D-207ENST00000476169 ABCC6O95255 1503 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 LRRC37A3O60309 1634 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 C2orf16Q68DN1 1984 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 IGLV1-50A0A075B6I6 118 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 LOC102724200A0A096LPH7 203 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-207ENST00000476169 IGKV6D-21A0A0A0MT36 114 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 IGHV1OR15-9A0A0B4J2B8 117 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 A0A1W2PP18 115 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 OR5H1A6NKK0 313 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 CD300LBA8K4G0 201 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 C8orf87E5RJ46 101 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 COX7A2P2O60397 106 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 HLA-DRAP01903 254 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 GABRA1P14867 456 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 KLK2P20151 261 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 PRPS1L1P21108 318 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 CCR7P32248 378 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 KIR3DL2P43630 455 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 HSPA13P48723 471 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 SULT1A1P50225 295 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 CRISP3P54108 245 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 ERVS71-1P61550 626 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 FMODQ06828 376 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 RSU1Q15404 277 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 GUK1Q16774 197 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 CENPWQ5EE01 88 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 HACD4Q5VWC8 232 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 RSBN1Q5VWQ0 802 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-207ENST00000476169 SAXO2Q658L1 398 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 GUSBP11Q6P575 273 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 NAA40Q86UY6 237 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 ITPRIPQ8IWB1 547 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 OR2M7Q8NG81 312 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 OR1M1Q8NGA1 313 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 OR11L1Q8NGX0 322 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 OR1P1Q8NH06 330 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 C15orf40Q8WUR7 153 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 IMP4Q96G21 291 aaKnown RBP2.93□□□□□ -1.94
VPS13D-207ENST00000476169 YPEL4Q96NS1 127 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 RNF157Q96PX1 679 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 PHB2Q99623 299 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 NRTNQ99748 197 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF436Q9C0F3 470 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-207ENST00000476169 DDX19AQ9NUU7 478 aaKnown RBP2.93□□□□□ -1.94
VPS13D-207ENST00000476169 PARVAQ9NVD7 372 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 DKKL1Q9UK85 242 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 POMPQ9Y244 141 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 KLF13Q9Y2Y9 288 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF706Q9Y5V0 76 aaPredicted RBP2.93□□□□□ -1.94
VPS13D-207ENST00000476169 WSB1Q9Y6I7 421 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 V9GYQ6 96 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 ABCA3Q99758 1704 aa2.93□□□□□ -1.94
VPS13D-207ENST00000476169 PLCH1Q4KWH8 1693 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 IGHV5-10-1A0A0J9YXX1 117 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 C5orf63A6NC05 138 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 EVPLLA8MZ36 301 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 C11orf94C9JXX5 98 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 FFAR1O14842 300 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 RGS5O15539 181 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 DENRO43583 198 aaKnown RBP2.92□□□□□ -1.94
VPS13D-207ENST00000476169 CNIH1O95406 144 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 EPPINO95925 133 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 CA2P00918 260 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 IGHV3-11P01762 117 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 HBZP02008 142 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 SOD3P08294 240 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 OR56A5P0C7T3 313 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF688P0C7X2 276 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF806P0C7X5 589 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 MYL12AP19105 171 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 CXCL3P19876 107 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 CCR6P51684 374 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 RAB2AP61019 212 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 RANP62826 216 aaKnown RBP2.92□□□□□ -1.94
VPS13D-207ENST00000476169 TAF1AQ15573 450 aaPredicted RBP2.92□□□□□ -1.94
VPS13D-207ENST00000476169 IL17AQ16552 155 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 LRRC26Q2I0M4 334 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 LRRC75BQ2VPJ9 315 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 SLC25A30Q5SVS4 291 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 OR10K2Q6IF99 312 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF774Q6NX45 483 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 FAM131AQ6UXB0 335 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 FA2HQ7L5A8 372 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 ZNF429Q86V71 674 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 PCP2Q8IVA1 136 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 TMEM256Q8N2U0 113 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 OR51D1Q8NGF3 324 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 OR10D3Q8NH80 312 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 OR1L1Q8NH94 360 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 EXOSC8Q96B26 276 aaKnown RBP2.92□□□□□ -1.94
VPS13D-207ENST00000476169 PDXPQ96GD0 296 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 IMMP1LQ96LU5 166 aa2.92□□□□□ -1.94
VPS13D-207ENST00000476169 C18orf15Q96N68 181 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms