RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TRAPPC2LQ9UL33 140 aa10.45□□□□□ -0.74
CPSF4-210ENST00000469897 DIMT1Q9UNQ2 313 aaKnown RBP10.45□□□□□ -0.74
CPSF4-210ENST00000469897 EXOSC1Q9Y3B2 195 aaKnown RBP10.45□□□□□ -0.74
CPSF4-210ENST00000469897 NOTCH3Q9UM47 2321 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 IRGMA1A4Y4 181 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 AP4M1O00189 453 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 GPX5O75715 221 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 MOSP00540 346 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 RPLP1P05386 114 aaKnown RBP10.44□□□□□ -0.74
CPSF4-210ENST00000469897 MYL12AP19105 171 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 CD1BP29016 333 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 F2RL1P55085 397 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 RAB25P57735 213 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 RPS11P62280 158 aaKnown RBP eCLIP10.44□□□□□ -0.74
CPSF4-210ENST00000469897 GPR176Q14439 515 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 LRRC36Q1X8D7 754 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 Q499Y3 187 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 CT45A1Q5HYN5 189 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 DMKNQ6E0U4 476 aaPredicted RBP10.44□□□□□ -0.74
CPSF4-210ENST00000469897 UNQ9370/PRO34162Q6UXP9 181 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 PRR18Q8N4B5 295 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 C8orf31Q8N9H6 132 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 TMEM104Q8NE00 496 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 OR10V1Q8NGI7 309 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 CT45A3Q8NHU0 189 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 GGHQ92820 318 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 RAX2Q96IS3 184 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 S1PR3Q99500 378 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 RASL11BQ9BPW5 248 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 GPR61Q9BZJ8 451 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 LIN7CQ9NUP9 197 aaKnown RBP10.44□□□□□ -0.74
CPSF4-210ENST00000469897 ETAA1Q9NY74 926 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 CKLFQ9UBR5 152 aa10.44□□□□□ -0.74
CPSF4-210ENST00000469897 MRPS28Q9Y2Q9 187 aaKnown RBP10.44□□□□□ -0.74
CPSF4-210ENST00000469897 C12orf77C9JDV5 145 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 CCL24O00175 119 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 SPINT2O43291 252 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 MAS1P04201 325 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 RCC1P18754 421 aaPredicted RBP10.43□□□□□ -0.74
CPSF4-210ENST00000469897 IL3RAP26951 378 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 SLC6A1P30531 599 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 VHLP40337 213 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 CD69Q07108 199 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 YIF1BQ5BJH7 314 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 RAB12Q6IQ22 244 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 SLC25A48Q6ZT89 311 aaKnown RBP10.43□□□□□ -0.74
CPSF4-210ENST00000469897 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 IZUMO1Q8IYV9 350 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 JAGN1Q8N5M9 183 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 OR1L1Q8NH94 360 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 CYGBQ8WWM9 190 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 TFAP2CQ92754 450 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 CYYR1Q96J86 154 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 SELENOIQ9C0D9 397 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 BANF2Q9H503 90 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 SPACA1Q9HBV2 294 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 GNG12Q9UBI6 72 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 PEX16Q9Y5Y5 336 aa10.43□□□□□ -0.74
CPSF4-210ENST00000469897 PNMA8CA0A1B0GUJ8 204 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 UBE2QL1A1L167 161 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 HBZP02008 142 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 ST3GAL4Q11206 333 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 GPR50Q13585 617 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 KIR2DS1Q14954 304 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 DEFB136Q30KP8 78 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 ZNF485Q8NCK3 441 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 ZNF439Q8NDP4 499 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 MRPS24Q96EL2 167 aaKnown RBP10.42□□□□□ -0.74
CPSF4-210ENST00000469897 PGLYRP3Q96LB9 341 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 RDH12Q96NR8 316 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 OR14A2Q96R54 314 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 HSPB9Q9BQS6 159 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 GON7Q9BXV9 100 aa10.42□□□□□ -0.74
CPSF4-210ENST00000469897 RCC2Q9P258 522 aaKnown RBP10.42□□□□□ -0.74
CPSF4-210ENST00000469897 TRBV5-7A0A0A0MS05 114 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 H0YHG0 523 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 CRTAPO75718 401 aaPredicted RBP10.41□□□□□ -0.74
CPSF4-210ENST00000469897 VSIG8P0DPA2 414 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 CDX1P47902 265 aaPredicted RBP10.41□□□□□ -0.74
CPSF4-210ENST00000469897 ADARB1P78563 741 aaKnown RBP10.41□□□□□ -0.74
CPSF4-210ENST00000469897 DGCR2P98153 550 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 MED21Q13503 144 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 Q3ZCU0 254 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 CXorf66Q5JRM2 361 aaPredicted RBP10.41□□□□□ -0.74
CPSF4-210ENST00000469897 TTC23Q5W5X9 447 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 AWAT2Q6E213 333 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 GAPTQ8N292 157 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 OR8H1Q8NGG4 311 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 OR52L2PQ8NGH6 319 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 RITA1Q96K30 269 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 TAF9BQ9HBM6 251 aa10.41□□□□□ -0.74
CPSF4-210ENST00000469897 DSCAML1Q8TD84 2053 aa10.4□□□□□ -0.74
CPSF4-210ENST00000469897 EBAG9O00559 213 aa10.4□□□□□ -0.74
CPSF4-210ENST00000469897 RRP9O43818 475 aaKnown RBP10.4□□□□□ -0.74
CPSF4-210ENST00000469897 ELANEP08246 267 aa10.4□□□□□ -0.74
CPSF4-210ENST00000469897 MGMTP16455 207 aa10.4□□□□□ -0.74
CPSF4-210ENST00000469897 FSTP19883 344 aa10.4□□□□□ -0.74
CPSF4-210ENST00000469897 SOX6P35712 828 aa10.4□□□□□ -0.74
CPSF4-210ENST00000469897 CAPGP40121 348 aa10.4□□□□□ -0.74
CPSF4-210ENST00000469897 FOXE3Q13461 319 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms