RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 PI4KAP42356 2102 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 CHD3Q12873 2000 aaKnown RBP11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 CXCL13O43927 109 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 CBR3O75828 277 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 CARD18P57730 90 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 CD81P60033 236 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 SSTP61278 116 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 HAPLN4Q86UW8 402 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 SMOC1Q9H4F8 434 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 GPR35Q9HC97 309 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 MTCH1Q9NZJ7 389 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 NCKAP5O14513 1909 aa11.09□□□□□ -0.63
PDZRN3-205ENST00000466780 TGOLN2O43493 480 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 DNPH1O43598 174 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 PSG2P11465 335 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 DBX2Q6ZNG2 339 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 OR51H1Q8NH63 302 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 NEK7Q8TDX7 302 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 CABLES2Q9BTV7 478 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 LRFN1Q9P244 771 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 KIAA2026Q5HYC2 2103 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 A0A087X0M5 115 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 KIR2DS1A0A191URI9 304 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 A0A1B0GX30 115 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 GJE1A6NN92 205 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 CD55P08174 381 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 PAX1P15863 534 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 KIR2DS4P43632 304 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 GPM6AP51674 278 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 PCBD1P61457 104 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 PRDX4Q13162 271 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 KIR2DS1Q14954 304 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 SSX9Q7RTT3 188 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 DMRTC2Q8IXT2 367 aaPredicted RBP11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 ZNF525Q8N782 197 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 RAB40CQ96S21 281 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 PRDM14Q9GZV8 571 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 FRYLO94915 3013 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 C9J4A7 227 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 IGKV1-39P01597 117 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 IGKV1D-39P04432 117 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 METTL15P1P0C7V9 234 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 PLA2G5P39877 138 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 WDR25Q64LD2 544 aaPredicted RBP11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 ZNF324BQ6AW86 544 aaPredicted RBP11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 MRPL30Q8TCC3 161 aaKnown RBP11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 WDR54Q9H977 334 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 PITPNC1Q9UKF7 332 aa11.08□□□□□ -0.64
PDZRN3-205ENST00000466780 SMCO3A2RU48 225 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 CEBPZOSA8MTT3 80 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 C3orf80F5H4A9 247 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 K7ESF4 209 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 CNOT4O95628 575 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 IGHV3-9P01782 118 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 OPN1MWP04001 364 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 CYC1P08574 325 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 CTXN2P0C2S0 81 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 OPN1MW2P0DN77 364 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 OPN1MW3P0DN78 364 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 IAPPP10997 89 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 EPHA8P29322 1005 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 ABLIM2Q6H8Q1 611 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 RPS19BP1Q86WX3 136 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 SCGB1C1Q8TD33 95 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 TSTD3H0UI37 97 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 IFNA10P01566 189 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 SLC25A6P12236 298 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 CLN3Q13286 438 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 RIPPLY2Q5TAB7 128 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 OR5R1Q8NH85 324 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 P2RX4Q99571 388 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 PSMG3Q9BT73 122 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 DUSP23Q9BVJ7 150 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 REPIN1Q9BWE0 567 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 CACNG5Q9UF02 275 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 VAX2Q9UIW0 290 aa11.07□□□□□ -0.64
PDZRN3-205ENST00000466780 KLF7O75840 302 aaPredicted RBP11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 SERPINE2P07093 398 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 RFPL3SP0C7P2 107 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 MDH2P40926 338 aaKnown RBP11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 MLF1P58340 268 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 LYSMD4Q5XG99 296 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 BEND4Q6ZU67 534 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 SAXO1Q8IYX7 474 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 OR10A7Q8NGE5 316 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 OR10D3Q8NH80 312 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 ADGRG7Q96K78 797 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 RBKSQ9H477 322 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 OR2W1Q9Y3N9 320 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 SYNGR1O43759 233 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 SYNGR2O43760 224 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 AMBPP02760 352 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 PFN1P07737 140 aaKnown RBP11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 CCL2P13500 99 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 NDUFB7P17568 137 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 SPINK2P20155 84 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 SRD5A2P31213 254 aa11.06□□□□□ -0.64
PDZRN3-205ENST00000466780 COL10A1Q03692 680 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms