RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 FGF9P31371 208 aaPredicted RBP10.39□□□□□ -0.75
COL5A1-206ENST00000465877 RAB13P51153 203 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 PSMD7P51665 324 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 ARHGDIBP52566 201 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 PRRX1P54821 245 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 TPTE2P1Q5T6R2 138 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 TMEM219Q86XT9 240 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 OR52M1Q8NGK5 317 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 LINC01006Q8NI28 216 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 CREB3L1Q96BA8 519 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 FAM3DQ96BQ1 224 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 RANBP3Q9H6Z4 567 aaPredicted RBP10.39□□□□□ -0.75
COL5A1-206ENST00000465877 RAB9BQ9NP90 201 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 MBNL3Q9NUK0 354 aaKnown RBP10.39□□□□□ -0.75
COL5A1-206ENST00000465877 TXNL4BQ9NX01 149 aaKnown RBP10.39□□□□□ -0.75
COL5A1-206ENST00000465877 GFOD1Q9NXC2 390 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 FBLN5Q9UBX5 448 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 STEAP1Q9UHE8 339 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 PITPNC1Q9UKF7 332 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 PSG11Q9UQ72 335 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 NBEAL1Q6ZS30 2694 aa10.39□□□□□ -0.75
COL5A1-206ENST00000465877 PKD1L1Q8TDX9 2849 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 TMEM272A0A1B0GTI8 110 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 SMIM30A4D0T7 59 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 A6NDX4 124 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 SPINT2O43291 252 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 RRP9O43818 475 aaKnown RBP10.38□□□□□ -0.75
COL5A1-206ENST00000465877 TSPAN9O75954 239 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 RCC1P18754 421 aaPredicted RBP10.38□□□□□ -0.75
COL5A1-206ENST00000465877 BLVRBP30043 206 aaPredicted RBP10.38□□□□□ -0.75
COL5A1-206ENST00000465877 RANBP1P43487 201 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 TMEM30BQ3MIR4 351 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 SLC16A12Q6ZSM3 486 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 PRR18Q8N4B5 295 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 OR4C13Q8NGP0 309 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 TOMM40LQ969M1 308 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 OR51E2Q9H255 320 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 RNF114Q9Y508 228 aa10.38□□□□□ -0.75
COL5A1-206ENST00000465877 A0A1W2PPE3 182 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 IFITM5A6NNB3 132 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 FOXI3A8MTJ6 420 aaPredicted RBP10.37□□□□□ -0.75
COL5A1-206ENST00000465877 OOSP1A8MZH6 123 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 LY6LH3BQJ8 138 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 LDLRAD4O15165 306 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 SOCS1O15524 211 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 HBZP02008 142 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 VEGFCP49767 419 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 LOXL3P58215 753 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 MADCAM1Q13477 382 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 CCDC144NLQ6NUI1 221 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 SHISA2Q6UWI4 295 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 CCBE1Q6UXH8 406 aaPredicted RBP10.37□□□□□ -0.75
COL5A1-206ENST00000465877 MOB1BQ7L9L4 216 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 NR2C2APQ86WQ0 139 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 FAM89BQ8N5H3 189 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 OR10X1Q8NGY0 326 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 OR1L1Q8NH94 360 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 RPEQ96AT9 228 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 FAAP24Q9BTP7 215 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 NPFFR1Q9GZQ6 430 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 C16orf95Q9H693 158 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 LIN7BQ9HAP6 207 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 TAF9BQ9HBM6 251 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 PLEKHJ1Q9NW61 149 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 SSR3Q9UNL2 185 aa10.37□□□□□ -0.75
COL5A1-206ENST00000465877 TET2Q6N021 2002 aaPredicted RBP10.36□□□□□ -0.75
COL5A1-206ENST00000465877 A0A1W2PPI3 338 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 HSD17B6O14756 317 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 NAPSAO96009 420 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 CD36P16671 472 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 GADD45AP24522 165 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 MNDAP41218 407 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 PROK1P58294 105 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 PLA2G7Q13093 441 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 C2orf76Q3KRA6 126 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 Q3ZCU0 254 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 FBLN7Q53RD9 439 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 FAM53AQ6NSI3 398 aaPredicted RBP10.36□□□□□ -0.75
COL5A1-206ENST00000465877 Q6ZPA2 131 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 ZNF439Q8NDP4 499 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 OR56B1Q8NGI3 324 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 OR10V1Q8NGI7 309 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 ARHGAP5-AS1Q96IT6 56 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 CHCHD6Q9BRQ6 235 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 CHMP1AQ9HD42 196 aaPredicted RBP10.36□□□□□ -0.75
COL5A1-206ENST00000465877 VCX3AQ9NNX9 186 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 KCNIP1Q9NZI2 227 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 GNG12Q9UBI6 72 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 JPT1Q9UK76 154 aa10.36□□□□□ -0.75
COL5A1-206ENST00000465877 A0A087WXM4 84 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 A0A0B4J203 849 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 LOC100506127A0A0U1RQW1 187 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 TIMM23O14925 209 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 SLC31A2O15432 143 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 CD24P25063 80 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 BRS3P32247 399 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 RAB7AP51149 207 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 EFNB2P52799 333 aa10.35□□□□□ -0.75
COL5A1-206ENST00000465877 TMEM50BP56557 158 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms