RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RRP9O43818 475 aaKnown RBP17.87■□□□□ 0.45
USP42-205ENST00000465073 ELANEP08246 267 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 GTF2F2P13984 249 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 OR5M8Q8NGP6 311 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 UBALD1Q8TB05 177 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 APH1BQ8WW43 257 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 S1PR3Q99500 378 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 RAB9BQ9NP90 201 aa17.87■□□□□ 0.45
USP42-205ENST00000465073 TXNL1O43396 289 aa17.86■□□□□ 0.45
USP42-205ENST00000465073 DCKP27707 260 aa17.86■□□□□ 0.45
USP42-205ENST00000465073 ETV1P50549 477 aa17.86■□□□□ 0.45
USP42-205ENST00000465073 RIPK1Q13546 671 aa17.86■□□□□ 0.45
USP42-205ENST00000465073 GPR176Q14439 515 aa17.86■□□□□ 0.45
USP42-205ENST00000465073 SLC22A6Q4U2R8 563 aa17.86■□□□□ 0.45
USP42-205ENST00000465073 SPACA1Q9HBV2 294 aa17.86■□□□□ 0.45
USP42-205ENST00000465073 IGHV3-43A0A0B4J1X8 118 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 OGG1O15527 345 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 IGHV3-43DP0DP04 118 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 ZNF137PP52743 207 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 TMEM30BQ3MIR4 351 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 C9orf66Q5T8R8 295 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 FAM53AQ6NSI3 398 aaPredicted RBP17.85■□□□□ 0.45
USP42-205ENST00000465073 LCNL1Q6ZST4 164 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 SMIM19Q96E16 107 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 ZNF184Q99676 751 aaPredicted RBP17.85■□□□□ 0.45
USP42-205ENST00000465073 BABAM2Q9NXR7 383 aa17.85■□□□□ 0.45
USP42-205ENST00000465073 SIRT4Q9Y6E7 314 aaPredicted RBP17.85■□□□□ 0.45
USP42-205ENST00000465073 ZNF736B4DX44 427 aaPredicted RBP17.84■□□□□ 0.45
USP42-205ENST00000465073 SPINT2O43291 252 aa17.84■□□□□ 0.45
USP42-205ENST00000465073 IGHG4P01861 327 aa17.84■□□□□ 0.45
USP42-205ENST00000465073 IGFBP3P17936 291 aaPredicted RBP17.84■□□□□ 0.45
USP42-205ENST00000465073 LUMP51884 338 aaPredicted RBP17.84■□□□□ 0.45
USP42-205ENST00000465073 DEFB136Q30KP8 78 aa17.84■□□□□ 0.45
USP42-205ENST00000465073 OR2G6Q5TZ20 316 aa17.84■□□□□ 0.45
USP42-205ENST00000465073 SLC25A48Q6ZT89 311 aaKnown RBP17.84■□□□□ 0.45
USP42-205ENST00000465073 TRAPPC2LQ9UL33 140 aa17.84■□□□□ 0.45
USP42-205ENST00000465073 A0A1W2PP11 408 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 C12orf77C9JDV5 145 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 MCRIP1C9JLW8 97 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 WBP4O75554 376 aaKnown RBP17.83■□□□□ 0.45
USP42-205ENST00000465073 GPX5O75715 221 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 SOX6P35712 828 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 CFHR3Q02985 330 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 SMN1Q16637 294 aaKnown RBP17.83■□□□□ 0.45
USP42-205ENST00000465073 FAM71E2Q8N5Q1 922 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 ZNF439Q8NDP4 499 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 MRPS24Q96EL2 167 aaKnown RBP17.83■□□□□ 0.45
USP42-205ENST00000465073 RCC2Q9P258 522 aaKnown RBP17.83■□□□□ 0.45
USP42-205ENST00000465073 GNG12Q9UBI6 72 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 CKLFQ9UBR5 152 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 ZNF580Q9UK33 172 aa17.83■□□□□ 0.45
USP42-205ENST00000465073 LSM4Q9Y4Z0 139 aaKnown RBP17.83■□□□□ 0.45
USP42-205ENST00000465073 TRBV5-5A0A0J9YX44 114 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 IRGMA1A4Y4 181 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 SLC31A2O15432 143 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 VDAC1P21796 283 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 F2RL1P55085 397 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 CT45A1Q5HYN5 189 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 C6orf183Q5T699 404 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 SYT6Q5T7P8 510 aaPredicted RBP17.82■□□□□ 0.44
USP42-205ENST00000465073 STEAP3Q658P3 488 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 CT45A3Q8NHU0 189 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 C4orf3Q8WVX3 66 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 GHSRQ92847 366 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 ORAI1Q96D31 301 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 HSPB9Q9BQS6 159 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 IGF1P05019 195 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 ZNF134P52741 427 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 ETAA1Q9NY74 926 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 U3KQK5 164 aa17.82■□□□□ 0.44
USP42-205ENST00000465073 SEC14L6B5MCN3 397 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 OR5H8P0DN80 308 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 MYL12AP19105 171 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 VHLP40337 213 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 Q499Y3 187 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 TRAT1Q6PIZ9 186 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 ZNF555Q8NEP9 628 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 OR13C5Q8NGS8 318 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 CHCHD6Q9BRQ6 235 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 S100A14Q9HCY8 104 aa17.81■□□□□ 0.44
USP42-205ENST00000465073 MRPS28Q9Y2Q9 187 aaKnown RBP17.81■□□□□ 0.44
USP42-205ENST00000465073 EXOSC1Q9Y3B2 195 aaKnown RBP17.81■□□□□ 0.44
USP42-205ENST00000465073 LANCL1O43813 399 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 CA11O75493 328 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 HBZP02008 142 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 PSMB8P28062 276 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 YIF1BQ5BJH7 314 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 DMKNQ6E0U4 476 aaPredicted RBP17.8■□□□□ 0.44
USP42-205ENST00000465073 RAB12Q6IQ22 244 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 GAPTQ8N292 157 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 PQLC1Q8N2U9 271 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 OR10V1Q8NGI7 309 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 OR4K15Q8NH41 348 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 KCTD7Q96MP8 289 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 PRR25Q96S07 402 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 SCOCQ9UIL1 159 aa17.8■□□□□ 0.44
USP42-205ENST00000465073 DIMT1Q9UNQ2 313 aaKnown RBP17.8■□□□□ 0.44
USP42-205ENST00000465073 TRAV8-7A0A075B6U6 113 aa17.79■□□□□ 0.44
USP42-205ENST00000465073 MAGEA13PA6NCF6 341 aa17.79■□□□□ 0.44
USP42-205ENST00000465073 ECI1P42126 302 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms