RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 IGHV4-59P01825 116 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 MT-ND4P03905 459 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 CD36P16671 472 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 RAB6AP20340 208 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 HTR1DP28221 377 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 SSTR5P35346 364 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 CEACAM3P40198 252 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 SERPINB10P48595 397 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 DYNLT3P51808 116 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 ARHGDIBP52566 201 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 FOXL1Q12952 345 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 P2RY14Q15391 338 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 HLA-DRB5Q30154 266 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 CADM3Q8N126 398 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 ABHD12Q8N2K0 398 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 FAM89BQ8N5H3 189 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 C8orf31Q8N9H6 132 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 OR56B1Q8NGI3 324 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 OR4P4Q8NGL7 312 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 OR9G1Q8NH87 305 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 DUX5Q96PT3 197 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 CHIAQ9BZP6 476 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 LPAR5Q9H1C0 372 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 RIMS4Q9H426 269 aaPredicted RBP9.62□□□□□ -0.87
VPS52-213ENST00000461743 MBNL3Q9NUK0 354 aaKnown RBP9.62□□□□□ -0.87
VPS52-213ENST00000461743 ING3Q9NXR8 418 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 HSF4Q9ULV5 492 aa9.62□□□□□ -0.87
VPS52-213ENST00000461743 A0A1B0GUS0 222 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 NOTOA8MTQ0 251 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 OOSP1A8MZH6 123 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 C15orf65H3BRN8 121 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 F2RL2O00254 374 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 TOR1AO14656 332 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 MMP23AO75900 390 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 NDUFA7O95182 113 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 PRRX1P54821 245 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 SCAND1P57086 179 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 NKAPLQ5M9Q1 402 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 HES5Q5TA89 166 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 OR10K2Q6IF99 312 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 CCDC144NLQ6NUI1 221 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 MFSD4AQ8N468 514 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 OR51D1Q8NGF3 324 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 CHAC2Q8WUX2 184 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 GCDHQ92947 438 aaPredicted RBP9.61□□□□□ -0.87
VPS52-213ENST00000461743 SSX3Q99909 188 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 NICN1Q9BSH3 213 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 MMP28Q9H239 520 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 OR51E2Q9H255 320 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 KCNK15Q9H427 330 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 LIN7BQ9HAP6 207 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 ZNF286AQ9HBT8 521 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 RAB22AQ9UL26 194 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 TRAPPC2LQ9UL33 140 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 MGAT4AQ9UM21 535 aa9.61□□□□□ -0.87
VPS52-213ENST00000461743 TRBV6-6A0A0A6YYG2 114 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 TMEM272A0A1B0GTI8 110 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 FOXI3A8MTJ6 420 aaPredicted RBP9.6□□□□□ -0.87
VPS52-213ENST00000461743 LEUTXA8MZ59 168 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 H3BUX3 64 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 SPINT2O43291 252 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 GPR137BO60478 399 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 SCGNO76038 276 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 GABARAPO95166 117 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 CRYBA1P05813 215 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 OMGP23515 440 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 GADD45AP24522 165 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 BLVRBP30043 206 aaPredicted RBP9.6□□□□□ -0.87
VPS52-213ENST00000461743 GDNFP39905 211 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 OR10A3P58181 314 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 C2orf76Q3KRA6 126 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 LHFPL4Q7Z7J7 247 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 NDNFQ8TB73 568 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 MRPL30Q8TCC3 161 aaKnown RBP9.6□□□□□ -0.87
VPS52-213ENST00000461743 ARL11Q969Q4 196 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 CHCHD6Q9BRQ6 235 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 ABCB10Q9NRK6 738 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 PLEKHJ1Q9NW61 149 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 GFOD1Q9NXC2 390 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 KCNIP1Q9NZI2 227 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 DPM3Q9P2X0 92 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 MMP24Q9Y5R2 645 aa9.6□□□□□ -0.87
VPS52-213ENST00000461743 A0A0A6YYD4 124 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 LOC100506127A0A0U1RQW1 187 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 UBE2QL1A1L167 161 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 METTL21EPA6NDL7 271 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 FAM181BA6NEQ2 426 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 C12orf77C9JDV5 145 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 BUB1B-PAK6H3BSN5 160 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 J3QR06 171 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 NAPSAO96009 420 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 NFYBP25208 207 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 CLDN12P56749 244 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 ARPC4P59998 168 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 SPCS2Q15005 226 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 ARL6IP1Q15041 203 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 DHRS7BQ6IAN0 325 aaPredicted RBP9.59□□□□□ -0.87
VPS52-213ENST00000461743 SFXN4Q6P4A7 337 aa9.59□□□□□ -0.87
VPS52-213ENST00000461743 ZNF880Q6PDB4 577 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms