RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 WBP2Q969T9 261 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 RCC1LQ96I51 464 aaKnown RBP9.02□□□□□ -0.96
LIN54-202ENST00000442461 S1PR3Q99500 378 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 PPIL1Q9Y3C6 166 aa9.02□□□□□ -0.96
LIN54-202ENST00000442461 A0A1W2PNR3 127 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 CA1P00915 261 aaPredicted RBP9.02□□□□□ -0.97
LIN54-202ENST00000442461 LIPFP07098 398 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 ERHP84090 104 aaKnown RBP9.02□□□□□ -0.97
LIN54-202ENST00000442461 NOXO1Q8NFA2 376 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 APOBEC3DQ96AK3 386 aaPredicted RBP9.02□□□□□ -0.97
LIN54-202ENST00000442461 GALMQ96C23 342 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 PSMG3Q9BT73 122 aaPredicted RBP9.02□□□□□ -0.97
LIN54-202ENST00000442461 TMEM222Q9H0R3 208 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 NRXN3Q9Y4C0 1643 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 A1L4Q6 167 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 H3BUT2 72 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 GALR2O43603 387 aaPredicted RBP9.02□□□□□ -0.97
LIN54-202ENST00000442461 HNRNPA1P09651 372 aaKnown RBP eCLIP9.02□□□□□ -0.97
LIN54-202ENST00000442461 GALNSP34059 522 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 CCR5P51681 352 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 UBE2L3P68036 154 aaKnown RBP9.02□□□□□ -0.97
LIN54-202ENST00000442461 RELBQ01201 579 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 EDDM3AQ14507 147 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 TMEM211Q6ICI0 200 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR5AS1Q8N127 324 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR2M7Q8NG81 312 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR5A1Q8NGJ0 315 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR1N1Q8NGS0 311 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR11L1Q8NGX0 322 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 ST6GALNAC6Q969X2 333 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 MRGPRFQ96AM1 343 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR6C1Q96RD1 312 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR51B2Q9Y5P1 312 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 SCN1AP35498 2009 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 TRAV9-2A0A087WT02 112 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 TRBV6-7A0A0A0MS04 114 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 LOC107984156A0A0G2JMH3 177 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 NKX6-3A6NJ46 265 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 OR2J3O76001 311 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 AMY1AP04745 511 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 ARL17AQ8IVW1 177 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
LIN54-202ENST00000442461 ZDHHC23Q8IYP9 409 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 NT5CQ8TCD5 201 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 TNFRSF14Q92956 283 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 CYTL1Q9NRR1 136 aa9.02□□□□□ -0.97
LIN54-202ENST00000442461 A0A1B0GWB2 263 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 DNPH1O43598 174 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 P01737 135 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 ARF6P62330 175 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 ZXDAP98168 799 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 RUNX3Q13761 415 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 ZNF519Q8TB69 540 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 C5orf30Q96GV9 206 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 LOXL4Q96JB6 756 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 RARRES3Q9UL19 164 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 DNAJC13O75165 2243 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 DDX60LQ5H9U9 1706 aaKnown RBP9.01□□□□□ -0.97
LIN54-202ENST00000442461 SELENOTP62341 195 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 RPL23P62829 140 aaKnown RBP9.01□□□□□ -0.97
LIN54-202ENST00000442461 RAC1P63000 192 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 RIGQ13278 110 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 IBA57Q5T440 356 aaKnown RBP9.01□□□□□ -0.97
LIN54-202ENST00000442461 Q6ZSR6 202 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 OR10AG1Q8NH19 301 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 RNASEH2CQ8TDP1 164 aaKnown RBP9.01□□□□□ -0.97
LIN54-202ENST00000442461 NEU1Q99519 415 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 HDHD3Q9BSH5 251 aaPredicted RBP9.01□□□□□ -0.97
LIN54-202ENST00000442461 RTL8AQ9BWD3 113 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 COMMD5Q9GZQ3 224 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 CST9LQ9H4G1 147 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 K7N7A8 449 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 ZNF217O75362 1048 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 ZNF324BQ6AW86 544 aaPredicted RBP9.01□□□□□ -0.97
LIN54-202ENST00000442461 SPRED2Q7Z698 418 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 DEFB118Q96PH6 123 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 FNDC4Q9H6D8 234 aaPredicted RBP9.01□□□□□ -0.97
LIN54-202ENST00000442461 ZNF391Q9UJN7 358 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 HS3ST3B1Q9Y662 390 aa9.01□□□□□ -0.97
LIN54-202ENST00000442461 TMEM238LA0A1B0GVL6 79 aa9□□□□□ -0.97
LIN54-202ENST00000442461 A6NJY4 79 aa9□□□□□ -0.97
LIN54-202ENST00000442461 PPIAL4DF5H284 164 aa9□□□□□ -0.97
LIN54-202ENST00000442461 CNIH1O95406 144 aa9□□□□□ -0.97
LIN54-202ENST00000442461 DEFB115Q30KQ5 88 aa9□□□□□ -0.97
LIN54-202ENST00000442461 OR1K1Q8NGR3 316 aa9□□□□□ -0.97
LIN54-202ENST00000442461 SSMEM1Q8WWF3 244 aa9□□□□□ -0.97
LIN54-202ENST00000442461 C20orf144Q9BQM9 153 aa9□□□□□ -0.97
LIN54-202ENST00000442461 ANAPC13Q9BS18 74 aa9□□□□□ -0.97
LIN54-202ENST00000442461 NEUROG3Q9Y4Z2 214 aa9□□□□□ -0.97
LIN54-202ENST00000442461 COX11Q9Y6N1 276 aa9□□□□□ -0.97
LIN54-202ENST00000442461 TPRP12270 2363 aaKnown RBP9□□□□□ -0.97
LIN54-202ENST00000442461 RP1L1Q8IWN7 2480 aaPredicted RBP9□□□□□ -0.97
LIN54-202ENST00000442461 GAGE12BA1L429 117 aa9□□□□□ -0.97
LIN54-202ENST00000442461 ITGBL1O95965 494 aaPredicted RBP9□□□□□ -0.97
LIN54-202ENST00000442461 IL3RAP26951 378 aa9□□□□□ -0.97
LIN54-202ENST00000442461 CEBPDP49716 269 aaPredicted RBP9□□□□□ -0.97
LIN54-202ENST00000442461 PRICKLE4Q2TBC4 344 aa9□□□□□ -0.97
LIN54-202ENST00000442461 TEX38Q6PEX7 206 aa9□□□□□ -0.97
LIN54-202ENST00000442461 TMEM116Q8NCL8 245 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms