RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 SERPINA5P05154 406 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF806P0C7X5 589 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 LIPCP11150 499 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 MYOD1P15172 320 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 B4GALT1P15291 398 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 RPA2P15927 270 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 AKR1C4P17516 323 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SERPINA2P20848 420 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ITGA3P26006 1051 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 BLVRBP30043 206 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CALCRP30988 508 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 HRH1P35367 487 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR3A2P47893 321 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 HTR5AP47898 357 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 NPBWR1P48145 328 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 LHX2P50458 406 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 FUT6P51993 359 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CRIP2P52943 208 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CLDN18P56856 261 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 TAS2R46P59540 309 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CYCSP99999 105 aaKnown RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PSG4Q00888 419 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PLGLB1Q02325 96 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SRYQ05066 204 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 DHRS2Q13268 280 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PPP1R1AQ13522 171 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 GAMTQ14353 236 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 RSU1Q15404 277 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SURF2Q15527 256 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR1C1Q15619 314 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 MICBQ29980 383 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SNAI3Q3KNW1 292 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 CHRFAM7AQ494W8 412 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 NHLRC3Q5JS37 347 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 DCAF10Q5QP82 559 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 LY6G6FQ5SQ64 297 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 TSPO2Q5TGU0 170 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ASCL4Q6XD76 172 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 C17orf107Q6ZR85 190 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 RFPL4BQ6ZWI9 263 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC51BQ86UW2 128 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 COMMD7Q86VX2 200 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SKA3Q8IX90 412 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF100Q8IYN0 542 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 GBGT1Q8N5D6 347 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 THAP8Q8NA92 274 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ADAD2Q8NCV1 583 aaKnown RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMEM185AQ8NFB2 350 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR2M7Q8NG81 312 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5D18Q8NGL1 313 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR10K1Q8NGX5 313 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR6K3Q8NGY3 331 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 AKR7LQ8NHP1 331 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 MARCH1Q8TCQ1 289 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 NPRL2Q8WTW4 380 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 MITD1Q8WV92 249 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 BORCS8Q96FH0 119 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARHGAP5-AS1Q96IT6 56 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 TECTBQ96PL2 329 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PHB2Q99623 299 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PDCD10Q9BUL8 212 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ST6GALNAC5Q9BVH7 336 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PRRG4Q9BZD6 226 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 LINC00470Q9BZP3 86 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR2H1Q9GZK4 316 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ARL6Q9H0F7 186 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PPA2Q9H2U2 334 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ELL3Q9HB65 397 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 RAB9BQ9NP90 201 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZFP57Q9NU63 452 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF701Q9NV72 531 aaPredicted RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 PLEKHJ1Q9NW61 149 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SHPKQ9UHJ6 478 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC7A11Q9UPY5 501 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 NOSIPQ9Y314 301 aaKnown RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 STRAPQ9Y3F4 350 aaKnown RBP2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 TMED3Q9Y3Q3 217 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 TRANK1O15050 2925 aa2.88□□□□□ -1.95
HMGB3P11-201ENST00000440127 ADAMTS9Q9P2N4 1935 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 CHD7Q9P2D1 2997 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 GOLGA4Q13439 2230 aaKnown RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 SPAG17Q6Q759 2223 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 BRCA2P51587 3418 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 TRAV14DV4A0A0A6YYC5 116 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF816-ZNF321PA0A0X1KG74 233 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 hCG_38984A0A1B0GV85 526 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 A0A1B0GW55 424 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 A0A1W2PNU3 283 aaPredicted RBP2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 KANTRA0A1W2PQU2 76 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM166BA8MTA8 275 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 CEACAM18A8MTB9 384 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF724A8MTY0 619 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM25EA8MYX2 175 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 EEF1E1-BLOC1S5C9J1V9 151 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 PRSS46E5RG02 174 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF587BE7ETH6 402 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 F8VVB4 439 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 F8VWA3 439 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 RPL36A-HNRNPH2H7BZ11 118 aa2.87□□□□□ -1.95
HMGB3P11-201ENST00000440127 CCSO14618 274 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms